RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 SYTL3Q4VX76 610 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 SEL1L2Q5TEA6 688 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 FAM69BQ5VUD6 431 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 ASB18Q6ZVZ8 466 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 LINC00523Q86TU6 105 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 AMIGO1Q86WK6 493 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 REXO1L1PQ8IX06 675 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 C17orf53Q8N3J3 647 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 SLC38A9Q8NBW4 561 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 OR5AR1Q8NGP9 310 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 OR1L3Q8NH93 324 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 SLC35B2Q8TB61 432 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 HDAC10Q969S8 669 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 ZNF501Q96CX3 271 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 FCRL4Q96PJ5 515 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 GPR87Q9BY21 358 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 TSGA10Q9BZW7 698 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 OR52A5Q9H2C5 316 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 MVB12BQ9H7P6 319 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 ETNK1Q9HBU6 452 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 C1GALT1Q9NS00 363 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 SLC2A6Q9UGQ3 507 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 SERTAD3Q9UJW9 196 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 POMT2Q9UKY4 750 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 PLAGL1Q9UM63 463 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 CAPN6Q9Y6Q1 641 aa9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 UTP20O75691 2785 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-235ENST00000522730 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TRBV5-4A0A0C4DH59 114 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 A6NL46 340 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 C2orf74A8MZ97 194 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 MEN1O00255 615 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 LIASO43766 372 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 OR1I1O60431 355 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 RFPL1O75677 317 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 ST6GAL1P15907 406 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 STIP1P31948 543 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 GRIA1P42261 906 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CD151P48509 253 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TERF1P54274 439 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 KLF1Q13351 362 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CRTC2Q53ET0 693 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 LCN10Q6JVE6 187 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TRIM73Q86UV7 250 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 C2orf73Q8N5S3 287 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CCDC89Q8N998 374 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 OR8K5Q8NH50 307 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CFAP61Q8NHU2 1237 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CPT1BQ92523 772 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 HES6Q96HZ4 224 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TRAPPC9Q96Q05 1148 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 TFB2MQ9H5Q4 396 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 ACTR5Q9H9F9 607 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 LZTFL1Q9NQ48 299 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 RAB6BQ9NRW1 208 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 IRAK4Q9NWZ3 460 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 ACTR10Q9NZ32 417 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 CIDEBQ9UHD4 219 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 ANAPC2Q9UJX6 822 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 PCDHGA6Q9Y5G7 932 aa9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 RP1L1Q8IWN7 2480 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-235ENST00000522730 SPTBP11277 2137 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 IGLV3-16A0A075B6K0 115 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 MROH6A6NGR9 719 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ISM1B1AKI9 464 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 H7C0S8 307 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 MATN2O00339 956 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 KRT86O43790 486 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 AP2A2O94973 939 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 GOT2P00505 430 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 FTH1P02794 183 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 OR56A5P0C7T3 313 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 CASRP41180 1078 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 NSG1P42857 185 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 MLLT10P55197 1068 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 CDH17Q12864 832 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 KLRB1Q12918 225 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ABRQ12979 859 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 RPA4Q13156 261 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 IL10RAQ13651 578 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 RPS6KA1Q15418 735 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 UGT8Q16880 541 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 KCTD19Q17RG1 926 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 PTCHD3Q3KNS1 767 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 PLEKHS1Q5SXH7 462 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 C1orf189Q5VU69 101 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 MLIPQ5VWP3 458 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 CPZQ66K79 652 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 UNC5AQ6ZN44 842 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 SLC13A5Q86YT5 568 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ADGRF3Q8IZF5 1079 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 RNF10Q8N5U6 811 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ENDOVQ8N8Q3 282 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 TTC1Q99614 292 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 ACSS2Q9NR19 701 aa9.92□□□□□ -0.82
CTNNA1-235ENST00000522730 SNX7Q9UNH6 387 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms