RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ACSL6Q9UKU0 697 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 LHX6Q9UPM6 363 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 TDRKHQ9Y2W6 561 aaKnown RBP17.35■□□□□ 0.37
CLK4-211ENST00000522556 HEBP2Q9Y5Z4 205 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 NFS1Q9Y697 457 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 FAM169AQ9Y6X4 670 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 TEX51A0A1B0GUA7 166 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 ERVK-10P10266 1014 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 PVRP15151 417 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 ZNF28P17035 718 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 PGAM1P18669 254 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 WT1P19544 449 aaPredicted RBP17.34■□□□□ 0.37
CLK4-211ENST00000522556 PPARGP37231 505 aaPredicted RBP17.34■□□□□ 0.37
CLK4-211ENST00000522556 ELK3P41970 407 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 ABRQ12979 859 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 MORF4L2Q15014 288 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 LONRF1Q17RB8 773 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 HSP90AA5PQ58FG0 334 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 DNTTIP2Q5QJE6 756 aaKnown RBP17.34■□□□□ 0.37
CLK4-211ENST00000522556 CNSTQ6PJW8 725 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 TRIM73Q86UV7 250 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 ADGRF3Q8IZF5 1079 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLK4-211ENST00000522556 CFAP61Q8NHU2 1237 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 KLHL6Q8WZ60 621 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 CFAP36Q96G28 342 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 ZDHHC12Q96GR4 267 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 SNF8Q96H20 258 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 RUNDC3BQ96NL0 473 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 EBNA1BP2Q99848 306 aaKnown RBP17.34■□□□□ 0.37
CLK4-211ENST00000522556 KLHL25Q9H0H3 589 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 SRMSQ9H3Y6 488 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 IARS2Q9NSE4 1012 aaKnown RBP17.34■□□□□ 0.37
CLK4-211ENST00000522556 SPHK1Q9NYA1 384 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 POMT2Q9UKY4 750 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 PCDHGA3Q9Y5H0 932 aa17.34■□□□□ 0.37
CLK4-211ENST00000522556 MAGEB16A2A368 324 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 GSAPA4D1B5 854 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 EFSO43281 561 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 SLCO2B1O94956 709 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 TIAF1O95411 115 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 APOA4P06727 396 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 EBLN1P0CF75 366 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 FOLR1P15328 257 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 PEBP1P30086 187 aaKnown RBP17.33■□□□□ 0.36
CLK4-211ENST00000522556 BDKRB1P46663 353 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 FOXM1Q08050 763 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 THOC5Q13769 683 aaKnown RBP17.33■□□□□ 0.36
CLK4-211ENST00000522556 GRB7Q14451 532 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 GBX1Q14549 363 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 TRADDQ15628 312 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 CCSMST1Q4G0I0 132 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 ARMC3Q5W041 872 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 ZNF449Q6P9G9 518 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 TRMT10BQ6PF06 316 aaKnown RBP17.33■□□□□ 0.36
CLK4-211ENST00000522556 PCGF5Q86SE9 256 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 SDCCAG8Q86SQ7 713 aaPredicted RBP17.33■□□□□ 0.36
CLK4-211ENST00000522556 KCNMB4Q86W47 210 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 LRRC6Q86X45 466 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 DTX1Q86Y01 620 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 ANKMY2Q8IV38 441 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 ZFPM2Q8WW38 1151 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 IL17FQ96PD4 163 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 OR6C1Q96RD1 312 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 MENTQ9BUN1 341 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 DDA1Q9BW61 102 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 TFB2MQ9H5Q4 396 aaKnown RBP17.33■□□□□ 0.36
CLK4-211ENST00000522556 SEMA5BQ9P283 1151 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
CLK4-211ENST00000522556 TLCD2A6NGC4 264 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 HAUS5O94927 633 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 LIPCP11150 499 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 PKMP14618 531 aaKnown RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 NELFEP18615 380 aaKnown RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 GABRB3P28472 473 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 COL9A2Q14055 689 aaPredicted RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 ACSBG2Q5FVE4 666 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 RNF187Q5TA31 235 aaPredicted RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 KLHL35Q6PF15 583 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 UNC5AQ6ZN44 842 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 TIPARPQ7Z3E1 657 aaKnown RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 AMIGO1Q86WK6 493 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 FAM20CQ8IXL6 584 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 TBC1D21Q8IYX1 336 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 OR5K2Q8NHB8 316 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 FLVCR1-AS1Q8TAF5 88 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 ASZ1Q8WWH4 475 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 SLC41A2Q96JW4 573 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 PANX3Q96QZ0 392 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 TCF12Q99081 682 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 SPRY4Q9C004 299 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 TRIT1Q9H3H1 467 aaKnown RBP17.32■□□□□ 0.36
CLK4-211ENST00000522556 PRORYQ9H606 182 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 GRHL1Q9NZI5 618 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 FBXO5Q9UKT4 447 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 TEX264Q9Y6I9 313 aa17.32■□□□□ 0.36
CLK4-211ENST00000522556 NBEAQ8NFP9 2946 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 TOX3O15405 576 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms