RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ICKQ9UPZ9 632 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ASF1AQ9Y294 204 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 C2orf74A8MZ97 194 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 C21orf140B9A014 251 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 TMEM150CB9EJG8 249 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 QSOX1O00391 747 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 OR56A5P0C7T3 313 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 RPL22P35268 128 aaKnown RBP20.07■□□□□ 0.8
SDCBP-209ENST00000522243 ABRQ12979 859 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 SEMA3AQ14563 771 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 COLEC12Q5KU26 742 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 OR4L1Q8NH43 312 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 OR8K5Q8NH50 307 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 OR1L3Q8NH93 324 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 TRAPPC9Q96Q05 1148 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 FANCEQ9HB96 536 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 TDRKHQ9Y2W6 561 aaKnown RBP20.07■□□□□ 0.8
SDCBP-209ENST00000522243 TCAF1Q9Y4C2 921 aa20.07■□□□□ 0.8
SDCBP-209ENST00000522243 SLC5A10A0PJK1 596 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 BHMG1C9JSJ3 638 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-209ENST00000522243 NR1D1P20393 614 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 ACADLP28330 430 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 PRAMEP78395 509 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 TLE1Q04724 770 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 LAMB3Q13751 1172 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 CCNG2Q16589 344 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 SYTL3Q4VX76 610 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 LYPLAL1Q5VWZ2 237 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 LCN10Q6JVE6 187 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 UNC5AQ6ZN44 842 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 ZNF534Q76KX8 674 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 LDB1Q86U70 411 aaPredicted RBP20.06■□□□□ 0.8
SDCBP-209ENST00000522243 TRIM73Q86UV7 250 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 CHST8Q9H2A9 424 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 PLAGL1Q9UM63 463 aa20.06■□□□□ 0.8
SDCBP-209ENST00000522243 HELZ2Q9BYK8 2649 aaKnown RBP20.06■□□□□ 0.8
SDCBP-209ENST00000522243 SPTBP11277 2137 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 K7EM74 188 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 KLK3P07288 261 aaPredicted RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 TPBGLP0DKB5 382 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 PTPN4P29074 926 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 SESN2P58004 480 aaPredicted RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 RPS15P62841 145 aaKnown RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 ACVR1Q04771 509 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 FASTKD1Q53R41 847 aaKnown RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 PLEKHS1Q5SXH7 462 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 PPHLN1Q8NEY8 458 aaKnown RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 UBE2Q2Q8WVN8 375 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 CPT1BQ92523 772 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 CLIP3Q96DZ5 547 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 TTC1Q99614 292 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 GPR87Q9BY21 358 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 PITPNM3Q9BZ71 974 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 CHRAC1Q9NRG0 131 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 LATS2Q9NRM7 1088 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 RIMKLBQ9ULI2 386 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 FARSAQ9Y285 508 aaKnown RBP20.05■□□□□ 0.8
SDCBP-209ENST00000522243 TP53TG5Q9Y2B4 290 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 MAN2B2Q9Y2E5 1009 aa20.05■□□□□ 0.8
SDCBP-209ENST00000522243 IQCF5A8MTL0 148 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 MAP3K7O43318 606 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 CCDC175P0C221 793 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 KCNJ1P48048 391 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 CSRP3P50461 194 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 CRADDP78560 199 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 BASP1P80723 227 aaKnown RBP20.04■□□□□ 0.8
SDCBP-209ENST00000522243 LACTB2Q53H82 288 aaPredicted RBP20.04■□□□□ 0.8
SDCBP-209ENST00000522243 ZNF789Q5FWF6 425 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 CDHR3Q6ZTQ4 885 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 HOOK3Q86VS8 718 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 TBC1D21Q8IYX1 336 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 LKAAEAR1Q8TD35 194 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 EPN3Q9H201 632 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 SPHK1Q9NYA1 384 aa20.04■□□□□ 0.8
SDCBP-209ENST00000522243 MEN1O00255 615 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 DNAJB5O75953 348 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 FGGP02679 453 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 UGT2B7P16662 529 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 CYP2A7P20853 494 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 CCR7P32248 378 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SHMT2P34897 504 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 IL10RAQ13651 578 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 PCID2Q5JVF3 399 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 FAM69BQ5VUD6 431 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SPESP1Q6UW49 350 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 NLRP9Q7RTR0 991 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 GSTA5Q7RTV2 222 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SYVN1Q86TM6 617 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 VRK3Q8IV63 474 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 DSELQ8IZU8 1212 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 KRT222Q8N1A0 295 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 OR5K2Q8NHB8 316 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 TRIM55Q9BYV6 548 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SLC7A5P2Q9GIP4 190 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 ACTR5Q9H9F9 607 aaPredicted RBP20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SYTL2Q9HCH5 934 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 FAM60AQ9NP50 221 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 SERTAD3Q9UJW9 196 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 ANAPC5Q9UJX4 755 aa20.03■□□□□ 0.8
SDCBP-209ENST00000522243 TLK1Q9UKI8 766 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms