RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 BAIAP2Q9UQB8 552 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 TULP3O75386 442 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CNMDO75829 334 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 UROSP10746 265 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 PEX2P28328 305 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CHRNA4P43681 627 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 TRIM32Q13049 653 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 IL18R1Q13478 541 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 NEK5Q6P3R8 708 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 C2orf73Q8N5S3 287 aaPredicted RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 SLC47A1Q96FL8 570 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 LMLNQ96KR4 655 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CRISPLD1Q9H336 500 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 FAM92AA1XBS5 289 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 CHURC1-FNTBB4DL54 471 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 THRBP10828 461 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TAS2R39P59534 338 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 LY6G5CQ5SRR4 150 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 FAM131AQ6UXB0 335 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PEG10Q86TG7 708 aaKnown RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 ZNF248Q8NDW4 579 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PHF10Q8WUB8 498 aaKnown RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 SMAD5Q99717 465 aaKnown RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 MCMBPQ9BTE3 642 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TRPS1Q9UHF7 1281 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PCDHGA10Q9Y5H3 936 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 SEMA3DO95025 777 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 MPSTP25325 297 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 VIPR1P32241 457 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 RING1Q06587 406 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 GTF2H2Q13888 395 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 GTF2H2CQ6P1K8 395 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 Q6ZVU0 165 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 SAMD14Q8IZD0 417 aaPredicted RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 MIPEPQ99797 713 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 UPK3BL1B0FP48 263 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 UPK3BL2E5RIL1 263 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 KDELR3O43731 214 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 SLC28A2O43868 658 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PLIN3O60664 434 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 CHRNA1P02708 482 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 CFHP08603 1231 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 HOXB2P14652 356 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 SLC18A1P54219 525 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PPM1JQ5JR12 505 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TP53INP1Q96A56 240 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 SHISA4Q96DD7 197 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TDRD1Q9BXT4 1180 aaKnown RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 XYLT2Q9H1B5 865 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 EBF3Q9H4W6 596 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 ITM2CQ9NQX7 267 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TMEM248Q9NWD8 314 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 PTGFRNQ9P2B2 879 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 NOS1APO75052 506 aaPredicted RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 BMP7P18075 431 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 VARSP26640 1264 aaKnown RBP15.92■□□□□ 0.14
USP42-207ENST00000521713 SDC2P34741 201 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 ACVRL1P37023 503 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 GALNT2Q10471 571 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 XKR4Q5GH76 650 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 TWIST2Q8WVJ9 160 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 KLK6Q92876 244 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 ROPN1LQ96C74 230 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 FAM53CQ9NYF3 392 aa15.92■□□□□ 0.14
USP42-207ENST00000521713 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 OR6B1O95007 311 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CCNYL3P0C7X3 344 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ZNF24P17028 368 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ALAS2P22557 587 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CYB5D2Q8WUJ1 264 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 FCGR1BQ92637 280 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 GPR62Q9BZJ7 368 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CARS2Q9HA77 564 aaKnown RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 MAGEE1Q9HCI5 957 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 FBXL12Q9NXK8 326 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ANXA4P09525 319 aaPredicted RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 ZNF132P52740 706 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 C2orf80Q0P641 193 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ANKLE1Q8NAG6 615 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 SLCO2A1Q92959 643 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CDKN2AIPNLQ96HQ2 116 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CLPTM1LQ96KA5 538 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 C1orf74Q96LT6 269 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 RSPH9Q9H1X1 276 aaPredicted RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 CNTN6Q9UQ52 1028 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 OR1F1O43749 312 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 C22orf39Q6P5X5 142 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 TPRG1Q6ZUI0 275 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 NRSN1Q8IZ57 195 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 GPN1Q9HCN4 374 aaPredicted RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 ARL5AQ9Y689 179 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 A0A0J9YYE9 177 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 SUV39H1O43463 412 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 HCRTO43612 131 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 RHOP08100 348 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 MAPK12P53778 367 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 UGT2B15P54855 530 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 AQP4P55087 323 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 TUBA1BP68363 451 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ARL13AQ5H913 290 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms