RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ACY1Q03154 408 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 ABHD18Q0P651 414 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 HSPA14Q0VDF9 509 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 TUBB3Q13509 450 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 MAP7Q14244 749 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 ARMC3Q5W041 872 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 KIAA0930Q6ICG6 404 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 PPP1R3BQ86XI6 285 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 TBC1D21Q8IYX1 336 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 SLC22A15Q8IZD6 547 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 ADGRF3Q8IZF5 1079 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 UNC5BQ8IZJ1 945 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 NAT8LQ8N9F0 302 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 GRK7Q8WTQ7 553 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 ASZ1Q8WWH4 475 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 SLC12A9Q9BXP2 914 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 XAB2Q9HCS7 855 aaKnown RBP17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 PDE7BQ9NP56 450 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 C1GALT1Q9NS00 363 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 FGF21Q9NSA1 209 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 RARRES3Q9UL19 164 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 ICKQ9UPZ9 632 aa17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 SMG1Q96Q15 3661 aaKnown RBP17.35■□□□□ 0.37
TRAPPC9-211ENST00000521700 MAGEB16A2A368 324 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 SDR42E2A6NKP2 422 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 KIAA0754O94854 1291 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 CDH3P22223 829 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 RPS3P23396 243 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 AOAHP28039 575 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 PTRHD1Q6GMV3 140 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 MRNIPQ6NTE8 343 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 CASC4Q6P4E1 433 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 CYB5D1Q6P9G0 228 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 C6orf15Q6UXA7 325 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 UNC5AQ6ZN44 842 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 SDCCAG8Q86SQ7 713 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 LRRC6Q86X45 466 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 ESX1Q8N693 406 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 OTUD6BQ8N6M0 293 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 GALNT6Q8NCL4 622 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 OR5K2Q8NHB8 316 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 SERPINB12Q96P63 405 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 DDX47Q9H0S4 455 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 GPN2Q9H9Y4 310 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 GNPTGQ9UJJ9 305 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 BTRCQ9Y297 605 aa17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 TDRKHQ9Y2W6 561 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 FASNP49327 2511 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-211ENST00000521700 FAM237BA0A1B0GVD1 139 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 SLCO2B1O94956 709 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 APOA4P06727 396 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 STAT5AP42229 794 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 MAGEA3P43357 314 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 ABRQ12979 859 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 COL9A2Q14055 689 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 GPR19Q15760 415 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 TYSND1Q2T9J0 566 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 DNAJC21Q5F1R6 531 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 PAPD7Q5XG87 772 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 PWWP2BQ6NUJ5 590 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 BPHLQ86WA6 291 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.361e-7■■■■■ 60.9
TRAPPC9-211ENST00000521700 LPGAT1Q92604 370 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 KIAA1143Q96AT1 154 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 ZNF501Q96CX3 271 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 SLC45A3Q96JT2 553 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 BIRC8Q96P09 236 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 FCRL4Q96PJ5 515 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 PANX3Q96QZ0 392 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 PITPNM3Q9BZ71 974 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 SOHLH2Q9NX45 425 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 ACTR10Q9NZ32 417 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 SAMD15Q9P1V8 674 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 IL17BQ9UHF5 180 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 LNPEPQ9UIQ6 1025 aa17.33■□□□□ 0.36
TRAPPC9-211ENST00000521700 C2orf74A8MZ97 194 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 ST6GAL1P15907 406 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 PAMP19021 973 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 FMO4P31512 558 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 SHMT2P34897 504 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 EIF3BP55884 814 aaKnown RBP17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 TUBB4BP68371 445 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 TUBB2AQ13885 445 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 DHX34Q14147 1143 aaKnown RBP17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 LY6DQ14210 128 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 LINC00303Q3SY05 128 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 CTSL3PQ5NE16 218 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 TMTC4Q5T4D3 741 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 RNASEH2BQ5TBB1 312 aaKnown RBP17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 NEPROQ6NW34 567 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 TMEM135Q86UB9 458 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 CREG2Q8IUH2 290 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 PPIL6Q8IXY8 311 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 EXTL1Q92935 676 aa17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-211ENST00000521700 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms