RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CFTRP13569 1480 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 BICRAQ9NZM4 1560 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 TRIP12Q14669 1992 aaPredicted RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 A0A1W2PP11 408 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 LILRA5A6NI73 299 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 MAGEB17A8MXT2 336 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 POLR3GO15318 223 aaPredicted RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 INSIG1O15503 277 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 NDUFS4O43181 175 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 ZBTB43O43298 467 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GLULP15104 373 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 NMBRP28336 390 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 CTNNA1P35221 906 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 PDLIM4P50479 330 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 POLR2FP61218 127 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 SIRPAP78324 504 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 ROR1Q01973 937 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 AKAP17AQ02040 695 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 INAQ16352 499 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 FAM98BQ52LJ0 330 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 TRNP1Q6NT89 227 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 ABRAXAS1Q6UWZ7 409 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 CREB3L2Q70SY1 520 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 ZNF534Q76KX8 674 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 HAUS6Q7Z4H7 955 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GALNT13Q8IUC8 556 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 MAP7D3Q8IWC1 876 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 C1orf87Q8N0U7 546 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 RBMXL3Q8N7X1 1067 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 C9orf106Q8NAJ2 232 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 SNX21Q969T3 373 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 PTERQ96BW5 349 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 C8orf76Q96K31 380 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 DGAT2Q96PD7 388 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 PANK2Q9BZ23 570 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GAREM1Q9H706 876 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 MRGBPQ9NV56 204 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GDE1Q9NZC3 331 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 RCC2Q9P258 522 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 KCNS2Q9ULS6 477 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 PRELID1Q9Y255 219 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 WBP11Q9Y2W2 641 aaKnown RBP6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 TRPV2Q9Y5S1 764 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 TMEM94Q12767 1356 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GPRASP1Q5JY77 1395 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 USP47Q96K76 1375 aa6.41□□□□□ -1.38
NUDCD1-204ENST00000521439 GOLGA6L10A6NI86 522 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TMEM189-UBE2V1I3L0A0 370 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 UBE2CO00762 179 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SMAD6O43541 496 aaKnown RBP6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 BAG2O95816 211 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 VPREB1P12018 145 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 DAOP14920 347 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 MYOD1P15172 320 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 NR2F2P24468 414 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TMOD1P28289 359 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 CTSCP53634 463 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 DSCR9P59020 149 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 ARPC4P59998 168 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 LRRC74AQ0VAA2 488 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 UBE2V1Q13404 147 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 C9orf152Q5JTZ5 239 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 GALNT17Q6IS24 598 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SPATA2LQ8IUW3 424 aaPredicted RBP6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TRIM58Q8NG06 486 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 OR8H1Q8NGG4 311 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 LILRB1Q8NHL6 650 aaPredicted RBP6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TBC1D16Q8TBP0 767 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SLC20A1Q8WUM9 679 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SLC38A5Q8WUX1 472 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 LPGAT1Q92604 370 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 RTP4Q96DX8 246 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 LYZL4Q96KX0 146 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TM6SF1Q9BZW5 370 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 TSGA10Q9BZW7 698 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 ANAPC2Q9UJX6 822 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 VDAC3Q9Y277 283 aa6.4□□□□□ -1.38
NUDCD1-204ENST00000521439 SOS1Q07889 1333 aaPredicted RBP6.4□□□□□ -1.39
NUDCD1-204ENST00000521439 RTEL1-TNFRSF6BF6WH68 1400 aa6.4□□□□□ -1.39
NUDCD1-204ENST00000521439 DNMT1P26358 1616 aaKnown RBP6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 A0A0G2JPF8 293 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 LACTBL1A8MY62 500 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 HNRNPCL2B2RXH8 293 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 HNRNPCL3B7ZW38 293 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 H0YIN7 160 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 KLHL41O60662 606 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 DKC1O60832 514 aaKnown RBP eCLIP6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 CAMTA2O94983 1202 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 ZWINTO95229 277 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 BCL10O95999 233 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 HNRNPCL4P0DMR1 293 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 SNHG28P0DPA3 235 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 RPS2P15880 293 aaKnown RBP6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 ATP5DP30049 168 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 ATP6V1E1P36543 226 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 CAPZA2P47755 286 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 THBS3P49746 956 aa6.39□□□□□ -1.39
NUDCD1-204ENST00000521439 COG7P83436 770 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms