RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ACSL5Q9ULC5 683 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 RUVBL2Q9Y230 463 aaKnown RBP14.96□□□□□ -0.01
LSM1-203ENST00000520755 OR52A4PA6NMU1 304 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 KPNA5O15131 536 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 MT-ND3P03897 115 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 MPOP05164 745 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 CCDC166P0CW27 439 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 BRAFP15056 766 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 SKIV2L2P42285 1042 aaKnown RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 ID4P47928 161 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 ACADVLP49748 655 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 SIM1P81133 766 aaPredicted RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 SLC18A2Q05940 514 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 CLCA4Q14CN2 919 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 TTLL9Q3SXZ7 439 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 TAF1BQ53T94 588 aaPredicted RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 AGBL2Q5U5Z8 902 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 AGAP9Q5VTM2 703 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 ABRAXAS1Q6UWZ7 409 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 WASH2PQ6VEQ5 465 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 CYHR1Q6ZMK1 362 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 CDHR3Q6ZTQ4 885 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 RAPH1Q70E73 1250 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 EFL1Q7Z2Z2 1120 aaKnown RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 GLRX5Q86SX6 157 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 RASGRP3Q8IV61 690 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 SFRP1Q8N474 314 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 IFI44Q8TCB0 444 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 ACMSDQ8TDX5 336 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 ASZ1Q8WWH4 475 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 TMEM159Q96B96 161 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 GPR78Q96P69 363 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 WASH6PQ9NQA3 447 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 CFAP20Q9Y6A4 193 aaKnown RBP14.95□□□□□ -0.02
LSM1-203ENST00000520755 RNF215Q9Y6U7 377 aa14.95□□□□□ -0.02
LSM1-203ENST00000520755 A0A087X1B8 175 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 KIR2DS5A0A0G2JLQ3 304 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 A0A0G2JNG1 304 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 EME2A4GXA9 379 aaPredicted RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 GOLGA6L10A6NI86 522 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 OR5K4A6NMS3 321 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 KIR2DS3K7RE56 304 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 EIF3FO00303 357 aaPredicted RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 ZBTB14O43829 449 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 SNRNP200O75643 2136 aaKnown RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 CBSLP0DN79 551 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 ENO3P13929 434 aaPredicted RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 CD1DP15813 335 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 KRT4P19013 534 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 ACP1P24666 158 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 ACADLP28330 430 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CBSP35520 551 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 RPA4Q13156 261 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CSHL1Q14406 222 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 KIR2DS5Q14953 304 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 PERM1Q5SV97 790 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 SLC9B2Q86UD5 537 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 PDZD3Q86UT5 571 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 C17orf82Q86X59 251 aaPredicted RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 TRIM48Q8IWZ4 208 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CNPY4Q8N129 248 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 NAT6Q93015 286 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CCDC74AQ96AQ1 378 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 PTERQ96BW5 349 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 NXNL1Q96CM4 212 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CXorf40BQ96DE9 158 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 C12orf66Q96MD2 445 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 DERL2Q9GZP9 239 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 SYTL2Q9HCH5 934 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 MKS1Q9NXB0 559 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 ZNF624Q9P2J8 865 aaPredicted RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 LRIT1Q9P2V4 623 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 CPNE7Q9UBL6 633 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 NOVA2Q9UNW9 492 aaKnown RBP14.94□□□□□ -0.02
LSM1-203ENST00000520755 ACOT9Q9Y305 439 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 RP1P56715 2156 aa14.94□□□□□ -0.02
LSM1-203ENST00000520755 NPEPPSL1A6NEC2 478 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 RHPN2P1A8MT19 583 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 H3BQF6 201 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 CDC7O00311 574 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 RFPL3O75679 317 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 KLHL2O95198 593 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 VIPP01282 170 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 FTH1P19P0C7X4 201 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 MPC1LP0DKB6 136 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 GLB1P16278 677 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 SLC26A3P40879 764 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 IL2P60568 153 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 HHEXQ03014 270 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 RPE65Q16518 533 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 CAPRIN2Q6IMN6 1127 aaKnown RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 DUS1LQ6P1R4 473 aaKnown RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 NEK10Q6ZWH5 1172 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 CCDC91Q7Z6B0 441 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 TBC1D1Q86TI0 1168 aaPredicted RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 ZNF761Q86XN6 746 aaPredicted RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms