RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 RAB33BQ9H082 229 aa13.77□□□□□ -0.21
VEGFA-221ENST00000520265 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.21
VEGFA-221ENST00000520265 GPN2Q9H9Y4 310 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-221ENST00000520265 FANCEQ9HB96 536 aa13.77□□□□□ -0.21
VEGFA-221ENST00000520265 SIDT1Q9NXL6 827 aaKnown RBP13.77□□□□□ -0.21
VEGFA-221ENST00000520265 RARRES3Q9UL19 164 aa13.77□□□□□ -0.21
VEGFA-221ENST00000520265 SDK2Q58EX2 2172 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 K7ENP7 123 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 MATN2O00339 956 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 FOLR1P15328 257 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 NELFEP18615 380 aaKnown RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 CHRM3P20309 590 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 SHMT2P34897 504 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ACY1Q03154 408 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 PAPD7Q5XG87 772 aaKnown RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 INO80CQ6PI98 192 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 TAX1BP1Q86VP1 789 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 LRRC6Q86X45 466 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 TBC1D21Q8IYX1 336 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 NAT8LQ8N9F0 302 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 NKD1Q969G9 470 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 TRIM51Q9BSJ1 452 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 FBXO6Q9NRD1 293 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-221ENST00000520265 IRAK4Q9NWZ3 460 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ACTR10Q9NZ32 417 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ICKQ9UPZ9 632 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 ZFHX4Q86UP3 3567 aa13.76□□□□□ -0.21
VEGFA-221ENST00000520265 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 MAGEB16A2A368 324 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 PIPSLA2A3N6 862 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 ISM1B1AKI9 464 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 BHMG1C9JSJ3 638 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 BTN3A3O00478 584 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 KPNA5O15131 536 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 EFSO43281 561 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 NIPSNAP2O75323 286 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 LIFP15018 202 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 PVRP15151 417 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 OGNP20774 298 aaKnown RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 ARNTP27540 789 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 HSD11B2P80365 405 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 IL11RAQ14626 422 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 GPR19Q15760 415 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 LONRF1Q17RB8 773 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 ZNF658BQ4V348 819 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 HP1BP3Q5SSJ5 553 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 RNASEH2BQ5TBB1 312 aaKnown RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 VRK3Q8IV63 474 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 SLC22A15Q8IZD6 547 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 C2orf73Q8N5S3 287 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 OR5K2Q8NHB8 316 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 CFAP36Q96G28 342 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 KRT12Q99456 494 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 PPANQ9NQ55 473 aaKnown RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 FGF21Q9NSA1 209 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 POMT2Q9UKY4 750 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 SLC39A10Q9ULF5 831 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
VEGFA-221ENST00000520265 NEU2Q9Y3R4 380 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 PCDHGA4Q9Y5G9 962 aa13.75□□□□□ -0.21
VEGFA-221ENST00000520265 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 H3BMM5 538 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 CCDC188H7C350 402 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 TTI1O43156 1089 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 KATNA1O75449 491 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 BANF1O75531 89 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PRKAR1AP10644 381 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 ZNF28P17035 718 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PGAM1P18669 254 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 MAP4P27816 1152 aaKnown RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 AOAHP28039 575 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 ACADLP28330 430 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PRDX3P30048 256 aaKnown RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 BDKRB1P46663 353 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms