RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 KCNV2Q8TDN2 545 aa18.05■□□□□ 0.48
FAM49B-214ENST00000519540 HBEGFQ99075 208 aa18.05■□□□□ 0.48
FAM49B-214ENST00000519540 BRINP2Q9C0B6 783 aa18.05■□□□□ 0.48
FAM49B-214ENST00000519540 STOML1Q9UBI4 398 aa18.05■□□□□ 0.48
FAM49B-214ENST00000519540 NR5A2O00482 541 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 SYNCRIPO60506 623 aaKnown RBP18.04■□□□□ 0.48
FAM49B-214ENST00000519540 FKBP6O75344 327 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 PSIP1O75475 530 aaKnown RBP18.04■□□□□ 0.48
FAM49B-214ENST00000519540 DRD3P35462 400 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 GCKP35557 465 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 MTHFRP42898 656 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 PREPP48147 710 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 PTCHD3Q3KNS1 767 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 ZNF658BQ4V348 819 aaPredicted RBP18.04■□□□□ 0.48
FAM49B-214ENST00000519540 BCL7AQ4VC05 210 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 AAGABQ6PD74 315 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 BLOC1S3Q6QNY0 202 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 RNF165Q6ZSG1 346 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 EP400NLQ6ZTU2 488 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 ABHD8Q96I13 439 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 C1orf50Q9BV19 199 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 ZCCHC2Q9C0B9 1178 aaKnown RBP18.04■□□□□ 0.48
FAM49B-214ENST00000519540 RSPH9Q9H1X1 276 aaPredicted RBP18.04■□□□□ 0.48
FAM49B-214ENST00000519540 OR2AG1Q9H205 316 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 TRIM39Q9HCM9 518 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 CCL27Q9Y4X3 112 aa18.04■□□□□ 0.48
FAM49B-214ENST00000519540 KRT87PA6NCN2 255 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 CCDC85CA6NKD9 419 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 FFAR3O14843 346 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 LSM1O15116 133 aaKnown RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 GPR42O15529 346 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 LILRB5O75023 590 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 CLDN9O95484 217 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 RETREG3Q86VR2 466 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.03■□□□□ 0.484e-7■■■■■ 68.2
FAM49B-214ENST00000519540 ZNF513Q8N8E2 541 aaPredicted RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 FNDC5Q8NAU1 212 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 JADE3Q92613 823 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 SLC52A3Q9NQ40 469 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 CLDND1Q9NY35 253 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 GULP1Q9UBP9 304 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 NDUFAF1Q9Y375 327 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 ARHGEF33A8MVX0 844 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 E7ENX8 843 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 K7EQS6 105 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 WDR47O94967 919 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 CAPN3P20807 821 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 TNFRSF4P43489 277 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 AP2B1P63010 937 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 EMX2Q04743 252 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 VPS26BQ4G0F5 336 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 PDCD4Q53EL6 469 aaKnown RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 C8orf82Q6P1X6 216 aaPredicted RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 HOMEZQ8IX15 550 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 SLC22A15Q8IZD6 547 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 TDHQ8IZJ6 230 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 AADATQ8N5Z0 425 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 PCYOX1LQ8NBM8 494 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 PYCR2Q96C36 320 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 ROPN1LQ96C74 230 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 FBXL8Q96CD0 374 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 TEX37Q96LM6 180 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 TACO1Q9BSH4 297 aaKnown RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 FARSBQ9NSD9 589 aaKnown RBP18.03■□□□□ 0.48
FAM49B-214ENST00000519540 MAP10Q9P2G4 905 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 KLQ9UEF7 1012 aa18.03■□□□□ 0.48
FAM49B-214ENST00000519540 C9JVG2 144 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 MANBAO00462 879 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 MID1O15344 667 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ULK1O75385 1050 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ME2P23368 584 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 MAP4P27816 1152 aaKnown RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 PBLDP30039 288 aaPredicted RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 LTBRP36941 435 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 KIR2DL1P43626 348 aaPredicted RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ZFP36L2P47974 494 aaKnown RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 SESN3P58005 492 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 NR6A1Q15406 480 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 CST6Q15828 149 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 NEK5Q6P3R8 708 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 MTSS1LQ765P7 747 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 TRIM46Q7Z4K8 759 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 RNF148Q8N7C7 305 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 SLC26A7Q8TE54 656 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 TSPEARQ8WU66 669 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 EZH1Q92800 747 aaPredicted RBP18.02■□□□□ 0.48
FAM49B-214ENST00000519540 SLC29A3Q9BZD2 475 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ACTR8Q9H981 624 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 S100A14Q9HCY8 104 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 HEBP1Q9NRV9 189 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ADA2Q9NZK5 511 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 ATXN10Q9UBB4 475 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 CROTQ9UKG9 612 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 C15orf41Q9Y2V0 281 aa18.02■□□□□ 0.48
FAM49B-214ENST00000519540 SLC28A1O00337 649 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 NPC1O15118 1278 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 RNASEH1O60930 286 aaKnown RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 SLC22A3O75751 556 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms