RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 COX4I1P13073 169 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.82■■□□□ 1.24
SLIT3-204ENST00000518140 Q7L0L9 218 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 FAM124AQ86V42 546 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 ATP6V1E2Q96A05 226 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 FAM131CQ96AQ9 280 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 PYCR2Q96C36 320 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 ZCCHC2Q9C0B9 1178 aaKnown RBP22.82■■□□□ 1.24
SLIT3-204ENST00000518140 LRRC42Q9Y546 428 aa22.82■■□□□ 1.24
SLIT3-204ENST00000518140 A0A1W2PQU0 124 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 K7EPI3 171 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 UBDO15205 165 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 PLRG1O43660 514 aaKnown RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 STK16O75716 305 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 ENO2P09104 434 aaPredicted RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 PKNOX1P55347 436 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 MRPS21P82921 87 aaKnown RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 CDK3Q00526 305 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 IRF4Q15306 451 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 C11orf96Q7Z7L8 435 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 HMGCLL1Q8TB92 370 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 GLMNQ92990 594 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 TRIM54Q9BYV2 358 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 SLC16A5O15375 505 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 CAPN1P07384 714 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 ALDOCP09972 364 aaKnown RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 HIST1H2AGP0C0S8 130 aaPredicted RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 EPORP19235 508 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 HIST1H2ADP20671 130 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 MAT2AP31153 395 aaKnown RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 CPOXP36551 454 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 ADPRHP54922 357 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 SLC22A15Q8IZD6 547 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 TP53I13Q8NBR0 393 aaPredicted RBP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 MCOLN3Q8TDD5 553 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 SIPA1Q96FS4 1042 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 HIST1H2AHQ96KK5 128 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 MRGPRX1Q96LB2 322 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 HIST1H2AJQ99878 128 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 H2AFJQ9BTM1 129 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 C1QTNF2Q9BXJ5 285 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.81■■□□□ 1.24
SLIT3-204ENST00000518140 POLG2Q9UHN1 485 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 ANGPTL3Q9Y5C1 460 aa22.81■■□□□ 1.24
SLIT3-204ENST00000518140 GIPC1O14908 333 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 VEGFDO43915 354 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 PSIP1O75475 530 aaKnown RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 LMNAP02545 664 aaKnown RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 GSTM1P09488 218 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 GGT5P36269 586 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 HTR6P50406 440 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 SLC25A3Q00325 362 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 CDKL1Q00532 357 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 GSTM4Q03013 218 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 CCINQ13939 588 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TAF11Q15544 211 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 SLC44A4Q53GD3 710 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 FAM83HQ6ZRV2 1179 aaPredicted RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 MILR1Q7Z6M3 343 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 OR2T11Q8NH01 316 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 METTL6Q8TCB7 284 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 FAM3CQ92520 227 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 CMTM5Q96DZ9 223 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 HBEGFQ99075 208 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 ATG10Q9H0Y0 220 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 DENND2DQ9H6A0 471 aaPredicted RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TM7SF3Q9NS93 570 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 SLC23A2Q9UGH3 650 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 RNGTTO60942 597 aaKnown RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 CYP2A7P20853 494 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 BDKRB1P46663 353 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 PIK3CGP48736 1102 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 RPS21P63220 83 aaKnown RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 SP140Q13342 867 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 GTF2H3Q13889 308 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 NFE2L1Q14494 772 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 AGERQ15109 404 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 PTCHD3Q3KNS1 767 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TMEM259Q4ZIN3 620 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TMEM31Q5JXX7 168 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 CDKL4Q5MAI5 379 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 SNX32Q86XE0 403 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TUBGCP3Q96CW5 907 aa22.8■■□□□ 1.24
SLIT3-204ENST00000518140 NAF1Q96HR8 494 aaKnown RBP22.8■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3DA0A087WVF3 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3IA0A087WXS9 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3EA0A087X179 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3KA0A087X1G2 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3FA6NER0 549 aaPredicted RBP22.79■■□□□ 1.24
SLIT3-204ENST00000518140 LOC730098B7Z3J9 87 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3LB9A6J9 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 LIN7AO14910 233 aaPredicted RBP22.79■■□□□ 1.24
SLIT3-204ENST00000518140 OTCP00480 354 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3HP0C7X1 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3GQ6DHY5 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3CQ6IPX1 549 aa22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TRMT11Q7Z4G4 463 aaKnown RBP22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TBC1D3Q8IZP1 549 aaPredicted RBP22.79■■□□□ 1.24
SLIT3-204ENST00000518140 NUSAP1Q9BXS6 441 aaKnown RBP22.79■■□□□ 1.24
SLIT3-204ENST00000518140 TEX101Q9BY14 249 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms