RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 UBN1Q9NPG3 1134 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 A1CFQ9NQ94 594 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 TMEM106BQ9NUM4 274 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 C14orf119Q9NWQ9 140 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 CDC23Q9UJX2 597 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 RCOR1Q9UKL0 485 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 CACNG2Q9Y698 323 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 DLG5Q8TDM6 1919 aa-1.41□□□□□ -2.64
SNORA40.16-201ENST00000517238 COL4A1P02462 1669 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF487B1APH4 448 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 HOXC11O43248 304 aaPredicted RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 NBNO60934 754 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 MTA2O94776 668 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PIGRP01833 764 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 LIPFP07098 398 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PEPDP12955 493 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 TCF3P15923 654 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 SKIV2L2P42285 1042 aaKnown RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 MT4P47944 62 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 CAV2P51636 162 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACTA1P68133 377 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 KRT85P78386 507 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 GPS1Q13098 491 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYLC2Q14093 348 aaPredicted RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PCBP1Q15365 356 aaKnown RBP eCLIP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 SIX1Q15475 284 aaPredicted RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 EIF2S3LQ2VIR3 472 aaKnown RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 UAP1L1Q3KQV9 507 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PLEKHG6Q3KR16 790 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 CCDC14Q49A88 953 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 SHEQ5VZ18 495 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 TMEM198Q66K66 360 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 CES5AQ6NT32 575 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 RPUSD3Q6P087 351 aaKnown RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF880Q6PDB4 577 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZER1Q7Z7L7 766 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PARP16Q8N5Y8 322 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 GPRC5AQ8NFJ5 357 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR6B3Q8NGW1 331 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 SPPL2AQ8TCT8 520 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM227BQ96M60 508 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 NECTIN4Q96NY8 510 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 NMUR2Q9GZQ4 415 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 PRDM11Q9NQV5 511 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 WSB2Q9NYS7 404 aaPredicted RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 GGA3Q9NZ52 723 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF629Q9UEG4 869 aaPredicted RBP-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 NDRG3Q9UGV2 375 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 CHD4Q14839 1912 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 ABCA2Q9BZC7 2435 aa-1.42□□□□□ -2.64
SNORA40.16-201ENST00000517238 FER1L5A0AVI2 2057 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 WNK2Q9Y3S1 2297 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 A0A0G2JN53 185 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 FSD2A1L4K1 749 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 G3V2L1 256 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 C3orf84H3BNL1 204 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACKR2O00590 384 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 BET1O15155 118 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 NBR2O15453 112 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TXNL1O43396 289 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TMCC2O75069 709 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 KRT38O76015 456 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 IGLV6-57P01721 117 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 IGHG3P01860 377 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYP3A4P08684 503 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF688P0C7X2 276 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACVR1BP36896 505 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 P2RY4P51582 365 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 NDST1P52848 882 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC25A1P53007 311 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 GALCP54803 685 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 KCNA1Q09470 495 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ORC2Q13416 577 aaPredicted RBP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 DPYSQ14117 519 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SAFBQ15424 915 aaKnown RBP eCLIP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TAF13Q15543 124 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TMEM266Q2M3C6 531 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC45A4Q5BKX6 768 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM83BQ5T0W9 1011 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM102BQ5T8I3 360 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 GARNL3Q5VVW2 1013 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ANKRD40Q6AI12 368 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 PLAG1Q6DJT9 500 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR52W1Q6IF63 320 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 BRAT1Q6PJG6 821 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 DCLRE1AQ6PJP8 1040 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 GPR180Q86V85 440 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 VPS37DQ86XT2 251 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 AMOTL1Q8IY63 956 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 FTMTQ8N4E7 242 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACVR1CQ8NER5 493 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF461Q8TAF7 563 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 HMGCLL1Q8TB92 370 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 CSGALNACT1Q8TDX6 532 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 JAKMIP2Q96AA8 810 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TSNARE1Q96NA8 513 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TTC1Q99614 292 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 HNRNPABQ99729 332 aaKnown RBP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 OVOL2Q9BRP0 275 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 CADM1Q9BY67 442 aaKnown RBP-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms