RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 GPX3P22352 226 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PSMC2P35998 433 aaKnown RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ARL1P40616 181 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CLCN4P51793 760 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PRKAA1Q13131 559 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 UBE2V1Q13404 147 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OLIG2Q13516 323 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CAMK1Q14012 370 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DLG2Q15700 870 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NAB2Q15742 525 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LCN10Q6JVE6 187 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 C1orf228Q6PIY5 440 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TSSK4Q6SA08 328 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GDPGP1Q6ZNW5 385 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAML2Q8IZL2 1156 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CACNA2D3Q8IZS8 1091 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OR13C3Q8NGS6 347 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OR8K5Q8NH50 307 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 C9orf43Q8TAL5 461 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DAZLQ92904 295 aaKnown RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TRIM63Q969Q1 353 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TBC1D20Q96BZ9 403 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SAAL1Q96ER3 474 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SGF29Q96ES7 293 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF799Q96GE5 643 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FNBP1Q96RU3 617 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 REEP2Q9BRK0 252 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 URM1Q9BTM9 101 aaKnown RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NYXQ9GZU5 481 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PIGMQ9H3S5 423 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 JPT2Q9H910 190 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PPP1R14DQ9NXH3 145 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IL17CQ9P0M4 197 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 C19orf25Q9UFG5 118 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FBXW11Q9UKB1 542 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 B3GALT5Q9Y2C3 310 aa0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SPIN1Q9Y657 262 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.74□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HIVEP2P31629 2446 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IGHV4-30-2A0A087WSY4 118 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ABHD14A-ACY1A0A1B0GW23 586 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FAM168BA1KXE4 195 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 E9PI62 339 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 F5H423 210 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 H3BQ06 376 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAP2K7O14733 419 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF217O75362 1048 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SLC25A12O75746 678 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GCNT3O95395 438 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 BCL10O95999 233 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HIST1H2ABP04908 130 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MYL1P05976 194 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SUPT20HL2P0C7V6 817 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ACP2P11117 423 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HIST1H2ADP20671 130 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CA4P22748 312 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CPOXP36551 454 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PAFAH1B1P43034 410 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PIP4K2AP48426 406 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF133P52736 654 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KRTAP10-10P60014 251 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MRPS34P82930 218 aaKnown RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TFAP4Q01664 338 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DHODHQ02127 395 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GUCY2DQ02846 1103 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GAGE2BQ13066 116 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OS9Q13438 667 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EFR3AQ14156 821 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SQLEQ14534 574 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EFTUD2Q15029 972 aaKnown RBP eCLIP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FAM189A2Q15884 450 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PDCD2Q16342 344 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GAGE2EQ4V326 116 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SLC9B1Q4ZJI4 515 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GCNT6Q5T4J0 391 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 AGAP7PQ5VUJ5 663 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NAA35Q5VZE5 725 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ATG16L1Q676U5 607 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GAGE2AQ6NT46 116 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 JMJD6Q6NYC1 403 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TMEM207Q6UWW9 146 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TPRG1Q6ZUI0 275 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TMUB2Q71RG4 321 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 BTN2A1Q7KYR7 527 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HIST3H2AQ7L7L0 130 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GALNT5Q7Z7M9 940 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MOGAT3Q86VF5 341 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RPAP2Q8IXW5 612 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZC3H3Q8IXZ2 948 aaKnown RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RTL3Q8N8U3 475 aaKnown RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OR5T2Q8NGG2 359 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MRAPQ8TCY5 172 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TRAPPC12Q8WVT3 735 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HERVK_113Q902F9 699 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NSMAFQ92636 917 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ESAMQ96AP7 390 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ELP4Q96EB1 424 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RADILQ96JH8 1075 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PIP5K1AQ99755 562 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 APOL2Q9BQE5 337 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms