RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 OR6T1Q8NGN1 323 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 OR6F1Q8NGZ6 308 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 PPP1R35Q8TAP8 253 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GANCQ8TET4 914 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GCC1Q96CN9 775 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZC3HAV1LQ96H79 300 aaKnown RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 EGLN2Q96KS0 407 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 C18orf15Q96N68 181 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 RUNDC3BQ96NL0 473 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GFI1Q99684 422 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 MXRA8Q9BRK3 442 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 RBM24Q9BX46 236 aaKnown RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GLT8D2Q9H1C3 349 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 PNNQ9H307 717 aaKnown RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4Q9UBX2 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF391Q9UJN7 358 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 TPCN1Q9ULQ1 816 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC7A7Q9UM01 511 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 TENM4Q6N022 2769 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 A0A1B0GTH9 108 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 TMEM202A6NGA9 273 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 FRG2CA6NGY1 282 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 FAM90A26D6RGX4 464 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 F8W8V4 182 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 ENPP3O14638 875 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 VILLO15195 856 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 KLK10O43240 276 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 NXPH4O95158 308 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 SEC24AO95486 1093 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 C6orf47O95873 294 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 SELEP16581 610 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 AGAP20933 346 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 APOBEC1P41238 236 aaKnown RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 LHX1P48742 406 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 CLDN2P57739 230 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF177Q13360 481 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 ITPK1Q13572 414 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 IGFBP7Q16270 282 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 RAB6CQ53S08 254 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 METTL2BQ6P1Q9 378 aaKnown RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 MAEAQ7L5Y9 396 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC35F3Q8IY50 421 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 SAXO1Q8IYX7 474 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPICE1Q8N0Z3 855 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARIH2OSQ8N7S6 290 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 PCNPQ8WW12 178 aaKnown RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 METTL2AQ96IZ6 378 aaKnown RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 C10orf90Q96M02 699 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 FAM218AQ96MZ4 157 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 KIFC3Q9BVG8 833 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 CLPBQ9H078 707 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 RAB6CQ9H0N0 254 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 CAAP1Q9H8G2 361 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 FBXO9Q9UK97 447 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 RAB23Q9ULC3 237 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 PIAS3Q9Y6X2 628 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 CACNA1GO43497 2377 aa-1.24□□□□□ -2.61
RNU6-539P-201ENST00000516665 CHD4Q14839 1912 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARHGEF40Q8TER5 1519 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 COL22A1Q8NFW1 1626 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ABHD14A-ACY1A0A1B0GW23 586 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 CCDC189A1A4V9 331 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 FBLL1A6NHQ2 334 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 K7EQD1 137 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ANKRD28O15084 1053 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 PRPF3O43395 683 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 TXNL1O43396 289 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 BUD23O43709 281 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 FTCDO95954 541 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ANXA2P07355 339 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ATF3P18847 181 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 FUT3P21217 361 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 KLRK1P26718 216 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ROR1Q01973 937 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ACY1Q03154 408 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 FOXO1Q12778 655 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 SF3A3Q12874 501 aaKnown RBP eCLIP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 EFTUD2Q15029 972 aaKnown RBP eCLIP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 LINC00483Q53H64 154 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF506Q5JVG8 444 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF569Q5MCW4 686 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 SYDE2Q5VT97 1194 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 FAM71E1Q6IPT2 247 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 TMUB2Q71RG4 321 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 TBC1D26Q86UD7 250 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 WDR75Q8IWA0 830 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 MAPKAPK5-AS1Q8N8E1 139 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 BEST2Q8NFU1 509 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 PMFBP1Q8TBY8 1022 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 DIS3LQ8TF46 1054 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZDHHC19Q8WVZ1 309 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 C16orf74Q96GX8 76 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 MSLNLQ96KJ4 702 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 OSBPL11Q9BXB4 747 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC17A9Q9BYT1 436 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 NDST4Q9H3R1 872 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 C10orf88Q9H8K7 445 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 GPR108Q9NPR9 543 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 HINT3Q9NQE9 182 aaKnown RBP-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms