RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 HCAR3P49019 387 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 SPANXN4Q5MJ08 99 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 C17orf99Q6UX52 265 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 ISL2Q96A47 359 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 PANX1Q96RD7 426 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
SH3TC1-225ENST00000515682 NBNO60934 754 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 FGF1P05230 155 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 CD1DP15813 335 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 KCNC1P48547 511 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 ARHGAP15Q53QZ3 475 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 SYVN1Q86TM6 617 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 CAMKK1Q8N5S9 505 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 RTL3Q8N8U3 475 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 OTULINQ96BN8 352 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 SCLYQ96I15 445 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 TFB2MQ9H5Q4 396 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 A0A1W2PQH9 124 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 SCELO95171 688 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 HTR1EP28566 365 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 LEPRP48357 1165 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 OR13J1Q8NGT2 312 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 RPL3LQ92901 407 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 TSPAN18Q96SJ8 248 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 CRTAC1Q9NQ79 661 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 AIG1Q9NVV5 245 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 C14orf119Q9NWQ9 140 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 TNPO3Q9Y5L0 923 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 KERAO60938 352 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 EPN2O95208 641 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 RAPSNQ13702 412 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 SF3B4Q15427 424 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■■□ 20.3
SH3TC1-225ENST00000515682 TIGD6Q17RP2 521 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 AFTPHQ6ULP2 937 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 MARCH2Q9P0N8 246 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 S1PR4O95977 384 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 GNPDA1P46926 289 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 PPP3CCP48454 512 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 BRMS1LQ5PSV4 323 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 OTOP2Q7RTS6 562 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 PHF21AQ96BD5 680 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 ENPP5Q9UJA9 477 aa13.36□□□□□ -0.27
SH3TC1-225ENST00000515682 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ZW10O43264 779 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 TMCC2O75069 709 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 RFPL2O75678 378 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 POU2F1P14859 743 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 OR1D2P34982 312 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 MXD1Q05195 221 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 CCBE1Q6UXH8 406 aaPredicted RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 GALNT10Q86SR1 603 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 SYT12Q8IV01 421 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 DSN1Q9H410 356 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 LRTM1Q9HBL6 345 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 WDR6Q9NNW5 1121 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 STK25O00506 426 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 GNRH1P01148 92 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ST8SIA6P61647 398 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 TLE2Q04725 743 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 VPS37AQ8NEZ2 397 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 OR52B6Q8NGF0 335 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 GPR78Q96P69 363 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 NUSAP1Q9BXS6 441 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ATP13A3Q9H7F0 1226 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 IRAK2O43187 625 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 LZTS3O60299 673 aaPredicted RBP13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 LCKP06239 509 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 ATP6V1E1P36543 226 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 GDF5P43026 501 aa13.35□□□□□ -0.27
SH3TC1-225ENST00000515682 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms