RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 NT5DC3Q86UY8 548 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 HOOK3Q86VS8 718 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF655Q8N720 491 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-231ENST00000515620 CNTD1Q8N815 330 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 ANKRD20A12PQ8NF67 263 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 SLC22A11Q9NSA0 550 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 SEC14L3Q9UDX4 400 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 ACSL5Q9ULC5 683 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 HS3ST3B1Q9Y662 390 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 CCDC88CQ9P219 2028 aa10.12□□□□□ -0.79
CLDND1-231ENST00000515620 DOCK10Q96BY6 2186 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 C2orf74A8MZ97 194 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 CLDN14O95500 239 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 DRD2P14416 443 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 MSH3P20585 1137 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 MX2P20592 715 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 MST1P26927 711 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 SPAM1P38567 509 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 SSR1P43307 286 aaKnown RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 CASP6P55212 293 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 NOMO1Q15155 1222 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 LONRF2Q1L5Z9 754 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 CDKAL1Q5VV42 579 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 FAAH2Q6GMR7 532 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 SPESP1Q6UW49 350 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 SHISA6Q6ZSJ9 500 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 OR2L2Q8NH16 312 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 NACC2Q96BF6 587 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 IMP4Q96G21 291 aaKnown RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 RBM41Q96IZ5 413 aaKnown RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 BTBD6Q96KE9 485 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 XKR8Q9H6D3 395 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 MRM3Q9HC36 420 aaKnown RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
CLDND1-231ENST00000515620 PLA2G3Q9NZ20 509 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 ACTR10Q9NZ32 417 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 TINAGQ9UJW2 476 aa10.11□□□□□ -0.79
CLDND1-231ENST00000515620 DNHD1Q96M86 4753 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 TRAV17A0A0B4J275 112 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 GLYATL1P3A0A0U1RQE8 302 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 DYTNA2CJ06 578 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 LGALS16A8MUM7 142 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SLC19A2O60779 497 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 NDST3O95803 873 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 F10P00742 488 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ITGAXP20702 1163 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 AGAP20933 346 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ALAS2P22557 587 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 HMGCLP35914 325 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 GABRA4P48169 554 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 TNFSF10P50591 281 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 IFI35P80217 286 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 UBXN1Q04323 297 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 RBPJQ06330 500 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SLC10A2Q12908 348 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 PIGHQ14442 188 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ZIC1Q15915 447 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 RBBP7Q16576 425 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 C3AR1Q16581 482 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 CCDC70Q6NSX1 233 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 TLDC1Q6P9B6 456 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ADGRF3Q8IZF5 1079 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 OR11G2Q8NGC1 345 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 OR52E1Q8NGJ3 308 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SPATA22Q8NHS9 363 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 FAM71BQ8TC56 605 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 FKBP10Q96AY3 582 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 TRIM11Q96F44 468 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 FERD3LQ96RJ6 166 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 LMF1Q96S06 567 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SPSB2Q99619 263 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SPOCK3Q9BQ16 436 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 MESP1Q9BRJ9 268 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 HGH1Q9BTY7 390 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 TMUB1Q9BVT8 246 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 SOX17Q9H6I2 414 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-231ENST00000515620 ABI3Q9P2A4 366 aa10.1□□□□□ -0.79
CLDND1-231ENST00000515620 KLHL33A6NCF5 533 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 GAPDHSO14556 408 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 FANCGO15287 622 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 BUD23O43709 281 aaKnown RBP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 PMPCBO75439 489 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CRYABP02511 175 aaKnown RBP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 MYBL1P10243 752 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 UGT2B7P16662 529 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ARSEP51690 589 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CSNK1G2P78368 415 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ITGA9Q13797 1035 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 BCL7AQ4VC05 210 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ZDHHC20Q5W0Z9 365 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 SARM1Q6SZW1 724 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms