RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 LRRN3Q9H3W5 708 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 OSGEPL1Q9H4B0 414 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 STN1Q9H668 368 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 SARS2Q9NP81 518 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 CATSPERZQ9NTU4 200 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 ACSL5Q9ULC5 683 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CLCA2Q9UQC9 943 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PLLPQ9Y342 182 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 ACACBO00763 2458 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CEP295Q9C0D2 2601 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 A0A1W2PQM1 296 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 TMX2-CTNND1H3BSU7 103 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 NTN3O00634 580 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 PFDN6O15212 129 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 BIRC5O15392 142 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 EDF1O60869 148 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 NDUFS3O75489 264 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 VAPBO95292 243 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 TGDSO95455 350 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 VIPP01282 170 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 GSTA1P08263 222 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 ITGA2BP08514 1039 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 OR56A5P0C7T3 313 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 PAMP19021 973 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 ARNTP27540 789 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 RPL10P27635 214 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 ALDH4A1P30038 563 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 SLC19A1P41440 591 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 HALP42357 657 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 TTPAP49638 278 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 PRLHRP49683 370 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 LIMK2P53671 638 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 OR1D5P58170 312 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 SQSTM1Q13501 440 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 SPIDRQ14159 915 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 NFE2L1Q14494 772 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 NR1D2Q14995 579 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CLPPQ16740 277 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 AARS2Q5JTZ9 985 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 SPDYAQ5MJ70 313 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 KIAA0930Q6ICG6 404 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 MRNIPQ6NTE8 343 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 FAM83HQ6ZRV2 1179 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 ZNF438Q7Z4V0 828 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 TAX1BP1Q86VP1 789 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 RBM12BQ8IXT5 1001 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 UNC5BQ8IZJ1 945 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CLDN19Q8N6F1 224 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 DCBLD1Q8N8Z6 715 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 GPR150Q8NGU9 434 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 MGARPQ8TDB4 240 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CCT6BQ92526 530 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 ZNF75CPQ92670 426 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 DEPDC7Q96QD5 511 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 GFM1Q96RP9 751 aaKnown RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 TCF12Q99081 682 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 SLC38A3Q99624 504 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 RBBP8Q99708 897 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 FGFR1OP2Q9NVK5 253 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 SCHIP1Q9P0W5 487 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 ZFATQ9P243 1243 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 ZNF624Q9P2J8 865 aaPredicted RBP8.14□□□□□ -1.11
CCL28-204ENST00000514421 SLC17A7Q9P2U7 560 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 CPNE7Q9UBL6 633 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 KLK13Q9UKR3 277 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 PSAT1Q9Y617 370 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 PRSS21Q9Y6M0 314 aa8.14□□□□□ -1.11
CCL28-204ENST00000514421 COL5A1P20908 1838 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 FAM149AA5PLN7 773 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 TRABD2BA6NFA1 517 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 COPEO14579 308 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 PRMT5O14744 637 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 OR1I1O60431 355 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 RPLP0P05388 317 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 ERVK-10P10266 1014 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CD1CP29017 333 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 SPRP35270 261 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 CD151P48509 253 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CLDN6P56747 220 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 UBE2IP63279 158 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 PLOD1Q02809 727 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 HHEXQ03014 270 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 RPA4Q13156 261 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CAMK2BQ13554 666 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 THOC5Q13769 683 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 SEMA3AQ14563 771 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CLCA4Q14CN2 919 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 RPE65Q16518 533 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 ISXQ2M1V0 245 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 AMZ1Q400G9 498 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 RBM44Q6ZP01 1051 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 CDHR3Q6ZTQ4 885 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 KIAA0408Q6ZU52 694 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 TMEM26Q6ZUK4 368 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms