RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ACRBPQ8NEB7 543 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 TFGQ92734 400 aaPredicted RBP11.83□□□□□ -0.52
SNHG4-208ENST00000514110 VPS37BQ9H9H4 285 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 SYTL2Q9HCH5 934 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 ACTR10Q9NZ32 417 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 SMARCAL1Q9NZC9 954 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 SNX7Q9UNH6 387 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 ICKQ9UPZ9 632 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 PRSS21Q9Y6M0 314 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 NAV2Q8IVL1 2488 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 UTP20O75691 2785 aaKnown RBP11.83□□□□□ -0.52
SNHG4-208ENST00000514110 CCDC78A2IDD5 438 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 OR51F1A6NGY5 319 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 C2orf74A8MZ97 194 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF749O43361 778 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 CEACAM4O75871 244 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 SORBS2O94875 1100 aaKnown RBP11.82□□□□□ -0.52
SNHG4-208ENST00000514110 TMEM63AO94886 807 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 AP2A2O94973 939 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 GDF10P55107 478 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF385CQ66K41 422 aaPredicted RBP11.82□□□□□ -0.52
SNHG4-208ENST00000514110 SPESP1Q6UW49 350 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 TRIM73Q86UV7 250 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 TAB3Q8N5C8 712 aaPredicted RBP11.82□□□□□ -0.52
SNHG4-208ENST00000514110 ZBTB2Q8N680 514 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 OR5AR1Q8NGP9 310 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 STYXQ8WUJ0 223 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 LRRC45Q96CN5 670 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 LRRC40Q9H9A6 602 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 FAM60AQ9NP50 221 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 SERTAD3Q9UJW9 196 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
SNHG4-208ENST00000514110 R3HDM2Q9Y2K5 976 aaKnown RBP11.82□□□□□ -0.52
SNHG4-208ENST00000514110 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
SNHG4-208ENST00000514110 SPTBP11277 2137 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 MED13Q9UHV7 2174 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 TCRBV7S2A1N4TA0A589 114 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 BLACEA4D250 179 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 MROH6A6NGR9 719 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 A6NL46 340 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 E7EQ34 232 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF185O15231 689 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 MAP3K7O43318 606 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 HCRTR1O43613 425 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 VPS4BO75351 444 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 AP2A1O95782 977 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 TPBGLP0DKB5 382 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 UGT2B7P16662 529 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 GNLYP22749 145 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 PSMA3P25788 255 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ACADLP28330 430 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 NSG1P42857 185 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF75DP51815 510 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 VAV2P52735 878 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 KLF1Q13351 362 aaPredicted RBP11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ATP1A4Q13733 1029 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 BRD3Q15059 726 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 NCF4Q15080 339 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ZIC1Q15915 447 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 DEFB110Q30KQ9 67 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF449Q6P9G9 518 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 NAPRTQ6XQN6 538 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 UNC5AQ6ZN44 842 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 FDCSPQ8NFU4 85 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 OR2A14Q96R47 310 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 TMEM121Q9BTD3 319 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 NUDT9Q9BW91 350 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 SPHK1Q9NYA1 384 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF451Q9Y4E5 1061 aa11.81□□□□□ -0.52
SNHG4-208ENST00000514110 CCDC162PA2VCL2 907 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 H3BMH7 237 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 LIN7AO14910 233 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 ZNF189O75820 626 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 KLF7O75840 302 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 IPO7O95373 1038 aaKnown RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 FTCDO95954 541 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PTMAP06454 111 aaKnown RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 CTSBP07858 339 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GSTM1P09488 218 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 CBSLP0DN79 551 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 FOXN2P32314 431 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 CBSP35520 551 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GABRA4P48169 554 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GSTM4Q03013 218 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 P3H1Q32P28 736 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 CCDC38Q502W7 563 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PACS1Q6VY07 963 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PEX26Q7Z412 305 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms