RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 NOTCH4Q99466 2003 aa8.41□□□□□ -1.06
PPARGC1A-211ENST00000513205 NCF1BA6NI72 391 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 IQCF5A8MTL0 148 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 NCF1CA8MVU1 366 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 KPNA3O00505 521 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TRIM38O00635 465 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 RNASEH1O60930 286 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CLDN9O95484 217 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CATP04040 527 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 APODP05090 189 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CTSLP07711 333 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 NCF1P14598 390 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 HOXB6P17509 224 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 GM2AP17900 193 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 GPX3P22352 226 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 FCARP24071 287 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MAP4P27816 1152 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MAPK1P28482 360 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CCR7P32248 378 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MTHFRP42898 656 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MAGEA10P43363 369 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 PTDSS1P48651 473 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 KCNK10P57789 538 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 B4GALNT1Q00973 533 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 EMX2Q04743 252 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 BNIP2Q12982 314 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TRAF3Q13114 568 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 PRKG2Q13237 762 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 ENPP2Q13822 863 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 GTF2H3Q13889 308 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 SHHQ15465 462 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TMEM52BQ4KMG9 183 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 SYTL3Q4VX76 610 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 AGKQ53H12 422 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 C9orf50Q5SZB4 431 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 C9orf64Q5T6V5 341 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TMEM198Q66K66 360 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 ANKRD54Q6NXT1 300 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 UBE2R2Q712K3 238 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 ERN2Q76MJ5 926 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 GET4Q7L5D6 327 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 HSD11B1LQ7Z5J1 315 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 SYVN1Q86TM6 617 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 RASGRP3Q8IV61 690 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 MINDY1Q8N5J2 469 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CATSPER1Q8NEC5 780 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 METTL6Q8TCB7 284 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CYB5D2Q8WUJ1 264 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 WDR60Q8WVS4 1066 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 RCN3Q96D15 328 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 LINC00615Q96LM1 132 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 PPP1R36Q96LQ0 422 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 NECTIN4Q96NY8 510 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 NSUN5Q96P11 429 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 PBX4Q9BYU1 374 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TRIM15Q9C019 465 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 EBF3Q9H4W6 596 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 NOL11Q9H8H0 719 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 ENAMQ9NRM1 1142 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 ARL15Q9NXU5 204 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 C6orf203Q9P0P8 240 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 THAP10Q9P2Z0 257 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 CROTQ9UKG9 612 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 IKZF3Q9UKT9 509 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 SNX6Q9UNH7 406 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 YBX2Q9Y2T7 364 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 TMED5Q9Y3A6 229 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 KIAA1549LQ6ZVL6 1849 aa8.4□□□□□ -1.06
PPARGC1A-211ENST00000513205 KIAA0100Q14667 2235 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 A0A1W2PP18 115 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 FAM234BA2RU67 622 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 MEI4A8MW99 385 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 MRASO14807 208 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 GPR39O43194 453 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 TSPAN6O43657 245 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 ULK1O75385 1050 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 PSIP1O75475 530 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 BCAS2O75934 225 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 OR4F21O95013 312 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 CSPG5O95196 566 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 ADRB3P13945 408 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 HSD3B1P14060 373 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 ACADSP16219 412 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 JAK1P23458 1154 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 PRPH2P23942 346 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 HSD3B2P26439 372 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 ETV3P41162 512 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 VIPR2P41587 438 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 TNFRSF4P43489 277 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 HSPA14Q0VDF9 509 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 RPA4Q13156 261 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 LRP8Q14114 963 aa8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 BOP1Q14137 746 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-211ENST00000513205 MAP7Q14244 749 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms