RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	ADGRD2	Q7Z7M1	963 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	STKLD1	Q8NE28	680 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SLC35B2	Q8TB61	432 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	NKD2	Q969F2	451 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZBED3	Q96IU2	234 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF479	Q96JC4	524 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	HHIPL1	Q96JK4	782 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	LRR1	Q96L50	414 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	NUP58	Q9BVL2	599 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SIRPD	Q9H106	197 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	TOR3A	Q9H497	397 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	GSTO2	Q9H4Y5	243 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ASAH2	Q9NR71	780 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	WNT16	Q9UBV4	365 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	HACL1	Q9UJ83	578 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SORCS3	Q9UPU3	1222 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF644	Q9H582	1327 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	CFAP65	Q6ZU64	1925 aa	Known RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PNPLA7	Q6ZV29	1317 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	GRXCR1	A8MXD5	290 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	FOXE1	O00358	373 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SULT1B1	O43704	296 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ECD	O95905	644 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	MYZAP	P0CAP1	466 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF888	P0CJ79	500 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SRM	P19623	302 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PRPH2	P23942	346 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	KLRC2	P26717	231 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ACADL	P28330	430 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SHMT1	P34896	483 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	RAP1GAP	P47736	663 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	MVP	Q14764	893 aa	Known RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	FAM83E	Q2M2I3	478 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF829	Q3KNS6	432 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PDLIM3	Q53GG5	364 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	CARD17	Q5XLA6	110 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	GRHL2	Q6ISB3	625 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF529	Q6P280	563 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	DLEU7	Q6UYE1	221 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	MICALCL	Q6ZW33	695 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	LDB1	Q86U70	411 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	YRDC	Q86U90	279 aa	Known RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	GPAT4	Q86UL3	456 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	TDRP	Q86YL5	185 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZDHHC23	Q8IYP9	409 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	FUK	Q8N0W3	1084 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SPART	Q8N0X7	666 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PDPR	Q8NCN5	879 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	B4GALNT2	Q8NHY0	566 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	TBC1D15	Q8TC07	691 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	TAS1R2	Q8TE23	839 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	TSEN15	Q8WW01	171 aa	Known RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	MYLIP	Q8WY64	445 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	LRRC3B	Q96PB8	259 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	BTBD9	Q96Q07	612 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	OLFM1	Q99784	485 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	MRI1	Q9BV20	369 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	C1QTNF5	Q9BXJ0	243 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PKIB	Q9C010	78 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	FBXO44	Q9H4M3	255 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	PIGV	Q9NUD9	493 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	KLHL28	Q9NXS3	571 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	SLC24A2	Q9UI40	661 aa		6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.09	□□□□□ -1.43
CHD1-208	ENST00000512392	ZNF839	A8K0R7	811 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	C12orf71	A8MTZ7	269 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	FADS2P1	A8MWK0	482 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	ZNF197	O14709	1029 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	NDUFS6	O75380	124 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	VPS26A	O75436	327 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	CRTAP	O75718	401 aa	Predicted RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	PDE9A	O76083	593 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	SORBS2	O94875	1100 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	GAST	P01350	101 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	PTN	P21246	168 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	PAICS	P22234	425 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	UCP1	P25874	307 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RPS5	P46782	204 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	PPP1R8	Q12972	351 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	SEMA3B	Q13214	749 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	MAB21L1	Q13394	359 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	CDO1	Q16878	200 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	PLAC9	Q5JTB6	97 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	SPOUT1	Q5T280	376 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	NSUN7	Q8NE18	718 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	TRPV1	Q8NER1	839 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RAD54L	Q92698	747 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	CAVIN3	Q969G5	261 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	ULK4	Q96C45	1275 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RBM4B	Q9BQ04	359 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	H2AFJ	Q9BTM1	129 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RBM4	Q9BWF3	364 aa	Known RBP	6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	SPATC1L	Q9H0A9	340 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	UCK1	Q9HA47	277 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	CALHM2	Q9HA72	323 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RAB9B	Q9NP90	201 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	KLHL1	Q9NR64	748 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	RDH8	Q9NYR8	311 aa		6.08	□□□□□ -1.44
CHD1-208	ENST00000512392	CRLS1	Q9UJA2	301 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms