RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 MRPS18BQ9Y676 258 aaKnown RBP12.9□□□□□ -0.34
RNF4-215ENST00000511843 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
RNF4-215ENST00000511843 PRMT5O14744 637 aaPredicted RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 NDUFS3O75489 264 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ST6GAL1P15907 406 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 F8A1P23610 371 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 TTPAP49638 278 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 EIF3BP55884 814 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 HSD11B2P80365 405 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ABRQ12979 859 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PRKAA1Q13131 559 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 IL11RAQ14626 422 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 LINC00303Q3SY05 128 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PTRHD1Q6GMV3 140 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 PWWP2BQ6NUJ5 590 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PPP1R3BQ86XI6 285 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ADGRF3Q8IZF5 1079 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 D2HGDHQ8N465 521 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ZSCAN1Q8NBB4 408 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 CFAP61Q8NHU2 1237 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 CD180Q99467 661 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 P2RY12Q9H244 342 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 TRIT1Q9H3H1 467 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 TFB2MQ9H5Q4 396 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 FGF21Q9NSA1 209 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 SPHK1Q9NYA1 384 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 ACTR10Q9NZ32 417 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 RARRES3Q9UL19 164 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
RNF4-215ENST00000511843 RPS6KL1Q9Y6S9 549 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PCM1Q15154 2024 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 BOD1L1Q8NFC6 3051 aa12.89□□□□□ -0.35
RNF4-215ENST00000511843 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 KRT87PA6NCN2 255 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 AP3B1O00203 1094 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 NKX2-8O15522 239 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 NIPSNAP2O75323 286 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 BANF1O75531 89 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 ZBTB11O95625 1053 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 NTRK1P04629 796 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 AOAHP28039 575 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 PRDX3P30048 256 aaKnown RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 FMO4P31512 558 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 PPARGP37231 505 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 STAT5AP42229 794 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 GNG11P61952 73 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNF4-215ENST00000511843 ZNF789Q5FWF6 425 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 CTSL3PQ5NE16 218 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 PRAMEF17Q5VTA0 474 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 C6orf15Q6UXA7 325 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 UNC5AQ6ZN44 842 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 SLC22A15Q8IZD6 547 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 C2orf73Q8N5S3 287 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 EXD3Q8N9H8 876 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 OR5K2Q8NHB8 316 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 ZNF669Q96BR6 464 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 STAMBPL1Q96FJ0 436 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 CARD6Q9BX69 1037 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 AKIRIN1Q9H9L7 192 aaPredicted RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 PDE7BQ9NP56 450 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 CRYL1Q9Y2S2 319 aa12.88□□□□□ -0.35
RNF4-215ENST00000511843 SMG1Q96Q15 3661 aaKnown RBP12.88□□□□□ -0.35
RNF4-215ENST00000511843 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 C2orf74A8MZ97 194 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 CES2O00748 559 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 FANCGO15287 622 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 GPC4O75487 556 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 APOA4P06727 396 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 CHRM5P08912 532 aaPredicted RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 FAM87AP0C7U9 286 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 UGT2B7P16662 529 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 PEBP1P30086 187 aaKnown RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 DLSTP36957 453 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 FNTAP49354 379 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 ACY1Q03154 408 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 TBR1Q16650 682 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ANKRD20A4Q4UJ75 823 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 KIAA0930Q6ICG6 404 aaPredicted RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 FAM199XQ6PEV8 388 aaPredicted RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 TAX1BP1Q86VP1 789 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 FAM20CQ8IXL6 584 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 TBC1D21Q8IYX1 336 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms