RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SLC25A41Q8N5S1 370 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 OR52E1Q8NGJ3 308 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 CCDC120Q96HB5 630 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 OLFM3Q96PB7 478 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 TAAR6Q96RI8 345 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 RUBCNLQ9H714 662 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 ACTR10Q9NZ32 417 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 NDOR1Q9UHB4 597 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 DNHD1Q96M86 4753 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 C3orf70A6NLC5 250 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 MSH3P20585 1137 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 KDELR1P24390 212 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 KRT33BQ14525 404 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF658BQ4V348 819 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 BCL7AQ4VC05 210 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 B3GNTL1Q67FW5 361 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 BNC2Q6ZN30 1099 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 PARP9Q8IXQ6 854 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 GPR135Q8IZ08 494 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 NXPE1Q8N323 547 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF655Q8N720 491 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 C19orf47Q8N9M1 422 aaKnown RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 LINC00615Q96LM1 132 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 FERD3LQ96RJ6 166 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 SRPK1Q96SB4 655 aaKnown RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 TRABDQ9H4I3 376 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 OLAHQ9NV23 265 aa18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 MAP1AP78559 2803 aaPredicted RBP18.34■□□□□ 0.53
HMGCS1-206ENST00000511774 ANKHD1Q8IWZ3 2542 aaKnown RBP18.33■□□□□ 0.53
HMGCS1-206ENST00000511774 PCDH17O14917 1159 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 KLHL18O94889 574 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 PROSCO94903 275 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 PTPN3P26045 913 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 PDHA2P29803 388 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 ZNF630Q2M218 657 aaPredicted RBP18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 TEX44Q53QW1 395 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 AGAP7PQ5VUJ5 663 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 SLC9A4Q6AI14 798 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 SPESP1Q6UW49 350 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 KIRREL2Q6UWL6 708 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 MAP7D3Q8IWC1 876 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 FLVCR1-AS1Q8TAF5 88 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 ZNF398Q8TD17 642 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 BLOC1S5Q8TDH9 187 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 POM121Q96HA1 1249 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 MRGPRX2Q96LB1 330 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 AGAP4Q96P64 663 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 TRIM56Q9BRZ2 755 aaKnown RBP18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 AP1M1Q9BXS5 423 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 OR52A5Q9H2C5 316 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 TFB2MQ9H5Q4 396 aaKnown RBP18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 HS3ST3B1Q9Y662 390 aa18.33■□□□□ 0.52
HMGCS1-206ENST00000511774 ZNF469Q96JG9 3925 aaPredicted RBP18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 A0A087X0T9 212 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 A0A0A6YYK5 440 aaPredicted RBP18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 ZSCAN9O15535 394 aaPredicted RBP18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 PRAMEF1O95521 474 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 FAM228BP0C875 321 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 MMP11P24347 488 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 GCGRP47871 477 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 PRKG2Q13237 762 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 ITGA9Q13797 1035 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 ZDHHC20Q5W0Z9 365 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 CCDC70Q6NSX1 233 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 FAM180AQ6UWF9 173 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 MRGPRGQ86SM5 289 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 OXNAD1Q96HP4 312 aaPredicted RBP18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 TEKT5Q96M29 485 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 HGH1Q9BTY7 390 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 SPHK1Q9NYA1 384 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 ICKQ9UPZ9 632 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 HEBP2Q9Y5Z4 205 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 AP1M2Q9Y6Q5 423 aa18.32■□□□□ 0.52
HMGCS1-206ENST00000511774 C2orf74A8MZ97 194 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 C19orf84I3L1E1 186 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 WISP2O76076 250 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 COX6B1P14854 86 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 UGT2B7P16662 529 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 NFKB1P19838 968 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 WASHC5Q12768 1159 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 TLR1Q15399 786 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 CDSNQ15517 529 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 LINC00696Q6ZRV3 163 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 COX15Q7KZN9 410 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 AMIGO1Q86WK6 493 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 BCORP1Q8N888 145 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 HM13Q8TCT9 377 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 OR2A14Q96R47 310 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 SPSB2Q99619 263 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 ARL5AQ9Y689 179 aa18.31■□□□□ 0.52
HMGCS1-206ENST00000511774 DIAPH2O60879 1101 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 TPBGLP0DKB5 382 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms