RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CDH4P55283 916 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 PEX3P56589 373 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 TUBB4BP68371 445 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 IL13RA1P78552 427 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ATP2C1P98194 919 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 FCHO2Q0JRZ9 810 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 FOXI1Q12951 378 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SLAQ13239 276 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 MAB21L1Q13394 359 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 FHL1Q13642 323 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 DGCR6Q14129 220 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 GAMTQ14353 236 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 RPS6KA1Q15418 735 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SGSM1Q2NKQ1 1148 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 HNRNPA1L2Q32P51 320 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 MOGAT2Q3SYC2 334 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 LACTB2Q53H82 288 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 CDKL4Q5MAI5 379 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ARMC12Q5T9G4 340 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 AGBL2Q5U5Z8 902 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SNRNP48Q6IEG0 339 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 HEPHL1Q6MZM0 1159 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 C3orf33Q6P1S2 294 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 TTC27Q6P3X3 843 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SCARA5Q6ZMJ2 495 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 USP45Q70EL2 814 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 MAEAQ7L5Y9 396 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 OTOP2Q7RTS6 562 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 KANSL1Q7Z3B3 1105 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ADAMTSL2Q86TH1 951 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 NELFCDQ8IXH7 590 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 DSELQ8IZU8 1212 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 BPIFCQ8NFQ6 507 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 STEAP2Q8NFT2 490 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 OR2T34Q8NGX1 318 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 FAM71BQ8TC56 605 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ROBO4Q8WZ75 1007 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 RFT1Q96AA3 541 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 KIAA1143Q96AT1 154 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF707Q96C28 371 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 RASD2Q96D21 266 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SERAC1Q96JX3 654 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 APOLD1Q96LR9 279 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SAMD8Q96LT4 415 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SLC25A23Q9BV35 468 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 CACNG6Q9BXT2 260 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 BCL2L14Q9BZR8 327 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 IMPG2Q9BZV3 1241 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SLC22A4Q9H015 551 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ASB8Q9H765 288 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 METTL7AQ9H8H3 244 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 EBF2Q9HAK2 575 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SYTL2Q9HCH5 934 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 MAGEE1Q9HCI5 957 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 PALMDQ9NP74 551 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 C19orf12Q9NSK7 152 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 FAIMQ9NVQ4 179 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 BARHL2Q9NY43 387 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 SMARCAL1Q9NZC9 954 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 DNAI1Q9UI46 699 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF229Q9UJW7 825 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ADAM21Q9UKJ8 722 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 GABRQQ9UN88 632 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 EIF3LQ9Y262 564 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 VWA7Q9Y334 891 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF175Q9Y473 711 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 TEX264Q9Y6I9 313 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 MROH2AA6NES4 1674 aa4.45□□□□□ -1.7
NIPBL-206ENST00000509429 PPRC1Q5VV67 1664 aaKnown RBP4.45□□□□□ -1.7
NIPBL-206ENST00000509429 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 NRXN1Q9ULB1 1477 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 PLEKHH1Q9ULM0 1364 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 MROH1Q8NDA8 1641 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 A0A1W2PQ09 198 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 TRBC2A0A5B9 178 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 TRIM49BA6NDI0 452 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 OR5K3A6NET4 321 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 OR6C76A6NM76 312 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 GABRR3A8MPY1 467 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 ACOT7O00154 380 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 NOP56O00567 594 aaKnown RBP4.44□□□□□ -1.7
NIPBL-206ENST00000509429 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 SLC16A3O15427 465 aaKnown RBP4.44□□□□□ -1.7
NIPBL-206ENST00000509429 TLX2O43763 284 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-206ENST00000509429 PFKFB2O60825 505 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 NOS1APO75052 506 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-206ENST00000509429 RASSF9O75901 435 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 IL18RAPO95256 599 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 TNFRSF6BO95407 300 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 AHSA1O95433 338 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 SERPINA3P01011 423 aa4.44□□□□□ -1.7
NIPBL-206ENST00000509429 CALCAP01258 141 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms