RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 E9PQ18 207 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 GAPDHSO14556 408 aaPredicted RBP3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 ZWINTO95229 277 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 CLDN1O95832 211 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 MAGEA11P43364 429 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 KLHL26Q53HC5 615 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 ZNF613Q6PF04 617 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 PSRC1Q6PGN9 363 aaPredicted RBP3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 IL27RAQ6UWB1 636 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 BMPERQ8N8U9 685 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 OR5M8Q8NGP6 311 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 SYT15Q9BQS2 421 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 RTN4RQ9BZR6 473 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 S1PR5Q9H228 398 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 SDR39U1Q9NRG7 319 aaPredicted RBP3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 HACL1Q9UJ83 578 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 ZHX1Q9UKY1 873 aaPredicted RBP3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 MTUS1Q9ULD2 1270 aa3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 TP53BP1Q12888 1972 aaPredicted RBP3.99□□□□□ -1.77
UBE2D3-225ENST00000508476 HYKKA2RU49 373 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 LRRC72A6NJI9 287 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 F5H0A9 414 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 PAPSS1O43252 624 aaPredicted RBP3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 XRCC3O43542 346 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 PRKRAO75569 313 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 GABRA5P31644 462 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 CXCL9Q07325 125 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 SNAI3Q3KNW1 292 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 PHLDA2Q53GA4 152 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 FAAP20Q6NZ36 180 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 FIGLAQ6QHK4 219 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 CEP57L1Q8IYX8 460 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 TRIML1Q8N9V2 468 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 MAGED4Q96JG8 741 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 PKP2Q99959 881 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 RBM4BQ9BQ04 359 aaKnown RBP3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 P2RY12Q9H244 342 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 SMARCAD1Q9H4L7 1026 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 ATP13A3Q9H7F0 1226 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 TUBE1Q9UJT0 475 aa3.98□□□□□ -1.77
UBE2D3-225ENST00000508476 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 A0A1W2PN81 502 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 MSGN1A6NI15 193 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 KHDRBS3O75525 346 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 CHRNA7P36544 502 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 TPD52P55327 224 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 IRX6P78412 446 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 DDX10Q13206 875 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 TEAD2Q15562 447 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 HAUS6Q7Z4H7 955 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 MAATS1Q7Z4T9 603 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 LDB1Q86U70 411 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 FAM222BQ8WU58 562 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 SUSD6Q92537 303 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 SAT2Q96F10 170 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 FNBP1Q96RU3 617 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 FNDC11Q9BVV2 318 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 FGFBP2Q9BYJ0 223 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 KCNK15Q9H427 330 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 RPS10P5Q9NQ39 176 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 LRWD1Q9UFC0 647 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 SEC63Q9UGP8 760 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 ZDHHC2Q9UIJ5 367 aa3.97□□□□□ -1.77
UBE2D3-225ENST00000508476 AP3D1O14617 1153 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 ZNF195O14628 629 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 VILLO15195 856 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 SLC15A1P46059 708 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 PRKCZQ05513 592 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 CTU2Q2VPK5 515 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 DOK6Q6PKX4 331 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 RSRC2Q7L4I2 434 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 LACC1Q8IV20 430 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 TMEM139Q8IV31 216 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 ARHGAP24Q8N264 748 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 TRIM51Q9BSJ1 452 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 CLEC7AQ9BXN2 247 aa3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 ZNF701Q9NV72 531 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 WSB2Q9NYS7 404 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-225ENST00000508476 OR10H2O60403 315 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 DOK2O60496 412 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 TAF13Q15543 124 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 XKR3Q5GH77 459 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 RAB41Q5JT25 222 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 TEX38Q6PEX7 206 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 TMCO3Q6UWJ1 677 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 METTL7BQ6UX53 244 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 PTAR1Q7Z6K3 402 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 COMMD2Q86X83 199 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 LYG1Q8N1E2 194 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 FBXO39Q8N4B4 442 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 RAB42Q8N4Z0 105 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 ZNRF4Q8WWF5 429 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 IRGQQ8WZA9 623 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 DYRK2Q92630 601 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 AGAP3Q96P47 875 aa3.95□□□□□ -1.78
UBE2D3-225ENST00000508476 PAFAH2Q99487 392 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms