RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PARP16Q8N5Y8 322 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM83FQ8NEG4 500 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 LRTOMTQ8WZ04 291 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 STAMQ92783 540 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 FRMD6Q96NE9 622 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM111AQ96PZ2 611 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 SLC2A13Q96QE2 648 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CCNL2Q96S94 520 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CEP41Q9BYV8 373 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 DUSP22Q9NRW4 184 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 WARS2Q9UGM6 360 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 TBC1D24Q9ULP9 559 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNRF3Q9ULT6 936 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 C3P01024 1663 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 LAMB4A4D0S4 1761 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CARNS1A5YM72 827 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 WASH4PA8MWX3 477 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF99A8MXY4 864 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 AKR7A2O43488 359 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 HCRTR2O43614 444 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 PCDHGA12O60330 932 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CYP7B1O75881 506 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 PIAS1O75925 651 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ZBTB7AO95365 584 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 RAB3DO95716 219 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CHRM5P08912 532 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 QDPRP09417 244 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 PCMT1P22061 227 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ATP5A1P25705 553 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 RPL10P27635 214 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CEACAM6P40199 344 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 RFC3P40938 356 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ALDH3A2P51648 485 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 KPNA2P52292 529 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 NOMO3P69849 1222 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ABATP80404 500 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 TFDP2Q14188 446 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 SLC9A5Q14940 896 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 NOMO1Q15155 1222 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CYBRD1Q53TN4 286 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM122BQ7Z309 247 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 GALNT5Q7Z7M9 940 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 ZC3H3Q8IXZ2 948 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 VWA5B2Q8N398 1253 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 OR6B3Q8NGW1 331 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 REPS1Q96D71 796 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 NSMCE2Q96MF7 247 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 RDH12Q96NR8 316 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 CHMP1AQ9HD42 196 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM49BQ9NUQ9 324 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 PPP4R1LQ9P1A2 415 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 XPR1Q9UBH6 696 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 IRS2Q9Y4H2 1338 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 A2ML1A8K2U0 1454 aa10.63□□□□□ -0.71
PDLIM5-210ENST00000508216 RGSL1A5PLK6 1076 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 A8MXE2 369 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 H0YIV9 168 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 ARVCFO00192 962 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 PLOD3O60568 738 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 SNAPC5O75971 98 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 CNTN5O94779 1100 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 VAPBO95292 243 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 PRPS2P11908 318 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 TFEBP19484 476 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 GALNSP34059 522 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 NSFP46459 744 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 STAT5BP51692 787 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 GP2P55259 537 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 KLF10Q13118 480 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 POLD3Q15054 466 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 SYT16Q17RD7 645 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 BCL7AQ4VC05 210 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 TPRG1LQ5T0D9 272 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 ADGRF1Q5T601 910 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 FRMPD2Q68DX3 1309 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 OGFOD3Q6PK18 319 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 MSANTD1Q6ZTZ1 278 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 CHST3Q7LGC8 479 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 HSD17B13Q7Z5P4 300 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 NRARPQ7Z6K4 114 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 P2RY8Q86VZ1 359 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 KIAA0319LQ8IZA0 1049 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF619Q8N2I2 560 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 PPM1NQ8N819 430 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 AKR7LQ8NHP1 331 aa10.62□□□□□ -0.71
PDLIM5-210ENST00000508216 HUS1BQ8NHY5 278 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms