RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RNF13O43567 381 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CABYRO75952 493 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SRPRAP08240 638 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CALM1P0DP23 149 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CALM2P0DP24 149 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CALM3P0DP25 149 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 UGT1A1P22309 533 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PRDX6P30041 224 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SLC6A12P48065 614 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CCT3P49368 545 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 EFNA5P52803 228 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CDH6P55285 790 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SPEM2Q0P670 501 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TROAPQ12815 778 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 USF2Q15853 346 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SNAPC1Q16533 368 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 P3H1Q32P28 736 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TCERG1LQ5VWI1 586 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 NCAPH2Q6IBW4 605 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZPBP2Q6X784 338 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TRIM67Q6ZTA4 783 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TRABD2AQ86V40 505 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 LRRC8AQ8IWT6 810 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 RNF148Q8N7C7 305 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 OR7G1Q8NGA0 311 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ESAMQ96AP7 390 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CDRT15Q96T59 188 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 RIT2Q99578 217 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 GPA33Q99795 319 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SEMA4CQ9C0C4 833 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 OR52A5Q9H2C5 316 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 GEMIN7Q9H840 131 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 MANSC1Q9H8J5 431 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 MRPL39Q9NYK5 338 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 NKIRAS1Q9NYS0 192 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SEMA5BQ9P283 1151 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 DBR1Q9UK59 544 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 MGAT4BQ9UQ53 548 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZBTB1Q9Y2K1 713 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 MYOM1P52179 1685 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZNF521Q96K83 1311 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 MROH1Q8NDA8 1641 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 ADGRL1O94910 1474 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 C13orf42A0A1B0GVH6 325 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 IDH3BO43837 385 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 GAS8O95995 478 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CD1AP06126 327 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 SLC2A3P11169 496 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 G6PDP11413 515 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CCL2P13500 99 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 ATF6P18850 670 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PCYT1AP49585 367 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 GALCP54803 685 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 FAM3BP58499 235 aaPredicted RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 DAOAP59103 153 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 KRT76Q01546 638 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 SPCS2Q15005 226 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PCOLCEQ15113 449 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 MAPK6Q16659 721 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CCDC153Q494R4 210 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 MANEALQ5VSG8 457 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PLCXD3Q63HM9 321 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 SLFN12LQ6IEE8 588 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 MRPL14Q6P1L8 145 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CFAP77Q6ZQR2 320 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 KCTD8Q6ZWB6 473 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PAGE2Q7Z2X7 111 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 FRMD5Q7Z6J6 570 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 LINC00523Q86TU6 105 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 VRK2Q86Y07 508 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CNGA4Q8IV77 575 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 SIAH3Q8IW03 269 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 ADGRF4Q8IZF3 695 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 NLGN4XQ8N0W4 816 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 FBLIM1Q8WUP2 373 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 NSMCE1Q8WV22 266 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 OIT3Q8WWZ8 545 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PIGBQ92521 554 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 OR2A14Q96R47 310 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 FAM110AQ9BQ89 295 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 SCNM1Q9BWG6 230 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 ASPNQ9BXN1 380 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 IFIH1Q9BYX4 1025 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 NAPBQ9H115 298 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 ROPN1Q9HAT0 212 aaPredicted RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 HACD3Q9P035 362 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 GCNT4Q9P109 453 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 CD207Q9UJ71 328 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 PLEKHH1Q9ULM0 1364 aa7.34□□□□□ -1.23
PDGFRA-206ENST00000508170 MYOM2P54296 1465 aa7.34□□□□□ -1.24
PDGFRA-206ENST00000508170 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 ABCD4O14678 606 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 MDM4O15151 490 aa7.33□□□□□ -1.24
PDGFRA-206ENST00000508170 VPS26AO75436 327 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms