RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ARHGAP8P85298 464 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SDHAF4Q5VUM1 108 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FAM217AQ8IXS0 508 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 CPXM2Q8N436 756 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 TFB1MQ8WVM0 346 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SERPINB12Q96P63 405 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 BCL7BQ9BQE9 202 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 ZYG11BQ9C0D3 744 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 KIF9Q9HAQ2 790 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SERHLQ9NQF3 203 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FSCN3Q9NQT6 498 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PCDHB16Q9NRJ7 776 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 GPATCH2LQ9NWQ4 482 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 TEKT2Q9UIF3 430 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 LSM7Q9UK45 103 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 DNALI1O14645 258 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 GRM6O15303 877 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 DIAPH2O60879 1101 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SLC22A3O75751 556 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 UNC5CO95185 931 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 APEHP13798 732 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 ERCC2P18074 760 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FDFT1P37268 417 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 STAT5AP42229 794 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 CDK16Q00536 496 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 MORF4L2Q15014 288 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PRKD1Q15139 912 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 KYNUQ16719 465 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 RAB6CQ53S08 254 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 AADACL4Q5VUY2 407 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 AFMIDQ63HM1 303 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 Q6ZS46 218 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PRUNE1Q86TP1 453 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 GATAD2AQ86YP4 633 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF683Q8IZ20 524 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 UMODL1-AS1Q8N2C9 162 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 ZCCHC9Q8N567 271 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 RTL3Q8N8U3 475 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PIK3C3Q8NEB9 887 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 METTL21AQ8WXB1 218 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PPP1R14BQ96C90 147 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 CATSPER2Q96P56 530 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 RTKNQ9BST9 563 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FAM107BQ9H098 131 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 RAB6CQ9H0N0 254 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SLC25A18Q9H1K4 315 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 DNAJC17Q9NVM6 304 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SHOC2Q9UQ13 582 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 DENND4AQ7Z401 1863 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NYNRINQ9P2P1 1898 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 AGAP14A8MT82 685 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NOTOA8MTQ0 251 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 E9PAM4 449 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 F5H0A9 414 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 F5H5T6 163 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 H7C0C1 242 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 COCHO43405 550 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 S100A6P06703 90 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ZSCAN5DPP0CG00 497 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CDK4P11802 303 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CHN1P15882 459 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PSMA4P25789 261 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 SLC6A4P31645 630 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 MAGEA6P43360 314 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ETV1P50549 477 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ARHGDIBP52566 201 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PER3P56645 1201 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CORO7P57737 925 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PPIDQ08752 370 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PARP15Q460N3 678 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 MS4A13Q5J8X5 152 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 IL27RAQ6UWB1 636 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ZYG11AQ6WRX3 759 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NCCRP1Q6ZVX7 275 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 HTR3DQ70Z44 454 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 PXKQ7Z7A4 578 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 BCL6BQ8N143 479 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 OTUB2Q96DC9 234 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ZNF599Q96NL3 588 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 UHRF1Q96T88 793 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TMEM121Q9BTD3 319 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NCOR1P1Q9H4R4 102 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TASP1Q9H6P5 420 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 SFXN1Q9H9B4 322 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 NINJ2Q9NZG7 142 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 DTLQ9NZJ0 730 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 COX16Q9P0S2 106 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 FAM169AQ9Y6X4 670 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TRANK1O15050 2925 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 TYW5A2RUC4 315 aaKnown RBP7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ARHGAP42A6NI28 874 aa7.02□□□□□ -1.29
CLCN3-206ENST00000507875 ERI2A8K979 691 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms