RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 KRT12Q99456 494 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 NRTNQ99748 197 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 ZPBPQ9BS86 351 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 SPRY4Q9C004 299 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 TRIT1Q9H3H1 467 aaKnown RBP17.52■□□□□ 0.4
SSBP2-208ENST00000507655 SRMSQ9H3Y6 488 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 APMAPQ9HDC9 416 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 POLG2Q9UHN1 485 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 VPS9D1Q9Y2B5 631 aa17.52■□□□□ 0.4
SSBP2-208ENST00000507655 HEATR5BQ9P2D3 2071 aa17.52■□□□□ 0.39
SSBP2-208ENST00000507655 SEC16AO15027 2179 aa17.52■□□□□ 0.39
SSBP2-208ENST00000507655 STMND1H3BQB6 276 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 TP73O15350 636 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 BANF1O75531 89 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 SEC31AO94979 1220 aaKnown RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 S1PR4O95977 384 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ESR1P03372 595 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 POLR2CP19387 275 aaPredicted RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 FMO4P31512 558 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 KPNA2P52292 529 aaKnown RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 UCNP55089 124 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 SH3BP2P78314 561 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 PRKAA1Q13131 559 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 THOC5Q13769 683 aaKnown RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 TMED2Q15363 201 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 TGIF1Q15583 401 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 DNAJC21Q5F1R6 531 aaKnown RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ZNF789Q5FWF6 425 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ZNF470Q6ECI4 717 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ARMC6Q6NXE6 501 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 AMIGO1Q86WK6 493 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 KMT5CQ86Y97 462 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 SPATA4Q8NEY3 305 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 SNF8Q96H20 258 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
SSBP2-208ENST00000507655 CTRCQ99895 268 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 TWSG1Q9GZX9 223 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 LATS2Q9NRM7 1088 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 POMT2Q9UKY4 750 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ICKQ9UPZ9 632 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 CRYL1Q9Y2S2 319 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 ZFYVE26Q68DK2 2539 aa17.51■□□□□ 0.39
SSBP2-208ENST00000507655 H3BMM5 538 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 BTN3A3O00478 584 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 BTN3A1O00481 513 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 POLR1CO15160 346 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-208ENST00000507655 NIPSNAP2O75323 286 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 TTC4O95801 387 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 TPBGLP0DKB5 382 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 ITGA8P53708 1063 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 TMPRSS3P57727 454 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 CTBP1Q13363 440 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 GBX1Q14549 363 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 CRYMQ14894 314 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 PLEKHS1Q5SXH7 462 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 OTOAQ7RTW8 1153 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 DENND6AQ8IWF6 608 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 ADGRF3Q8IZF5 1079 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 CALML6Q8TD86 181 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 NAT9Q9BTE0 207 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 C20orf96Q9NUD7 363 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-208ENST00000507655 TMEM184BQ9Y519 407 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-208ENST00000507655 PCDHB11Q9Y5F2 797 aa17.5■□□□□ 0.39
SSBP2-208ENST00000507655 EFCAB8A8MWE9 144 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 PKMP14618 531 aaKnown RBP17.49■□□□□ 0.39
SSBP2-208ENST00000507655 SHMT2P34897 504 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 SLC1A2P43004 574 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 FOXM1Q08050 763 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 IL11RAQ14626 422 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 BBS9Q3SYG4 887 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 SPANXN3Q5MJ09 141 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 UNC5DQ6UXZ4 953 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 KCNMB4Q86W47 210 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 IGDCC3Q8IVU1 814 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 UNC5BQ8IZJ1 945 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 PDIK1LQ8N165 341 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 SNRNP27Q8WVK2 155 aaKnown RBP17.49■□□□□ 0.39
SSBP2-208ENST00000507655 PPM1MQ96MI6 270 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 PWWP2AQ96N64 755 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 OR6C1Q96RD1 312 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 CCNL2Q96S94 520 aaPredicted RBP17.49■□□□□ 0.39
SSBP2-208ENST00000507655 TRIM31Q9BZY9 425 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 XKR8Q9H6D3 395 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 CPNE5Q9HCH3 593 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 C1GALT1Q9NS00 363 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 PILRAQ9UKJ1 303 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 BTRCQ9Y297 605 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 FER1L5A0AVI2 2057 aa17.49■□□□□ 0.39
SSBP2-208ENST00000507655 MDC1Q14676 2089 aaKnown RBP17.48■□□□□ 0.39
SSBP2-208ENST00000507655 FAM187AA6NFU0 413 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 ZBTB11O95625 1053 aaPredicted RBP17.48■□□□□ 0.39
SSBP2-208ENST00000507655 FGF5P12034 268 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 PRDX3P30048 256 aaKnown RBP17.48■□□□□ 0.39
SSBP2-208ENST00000507655 RPL21P46778 160 aaKnown RBP17.48■□□□□ 0.39
SSBP2-208ENST00000507655 CXADRP78310 365 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 ABRQ12979 859 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 KYNUQ16719 465 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 HSP90AA5PQ58FG0 334 aa17.48■□□□□ 0.39
SSBP2-208ENST00000507655 UNC5AQ6ZN44 842 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms