RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	ITPR1	Q14643	2758 aa		13.74	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TEX51	A0A1B0GUA7	166 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459		K7ENP7	123 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	GPC4	O75487	556 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	STK17B	O94768	372 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	EBLN1	P0CF75	366 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	FOLR1	P15328	257 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	RPS3	P23396	243 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	AOAH	P28039	575 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MAGEA3	P43357	314 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	DR1	Q01658	176 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TYSND1	Q2T9J0	566 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CTSL3P	Q5NE16	218 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	RNF187	Q5TA31	235 aa	Predicted RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KIAA1614	Q5VZ46	1190 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ARMC3	Q5W041	872 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	INO80C	Q6PI98	192 aa	Predicted RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	OTOA	Q7RTW8	1153 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TIPARP	Q7Z3E1	657 aa	Known RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PCGF5	Q86SE9	256 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LRRC6	Q86X45	466 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SLC22A15	Q8IZD6	547 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	NLGN4X	Q8N0W4	816 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	AGGF1	Q8N302	714 aa	eCLIP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	OR5K2	Q8NHB8	316 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	GSDMB	Q8TAX9	411 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SKA2	Q8WVK7	121 aa	Predicted RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LPGAT1	Q92604	370 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SLCO2A1	Q92959	643 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	STAMBPL1	Q96FJ0	436 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SLC41A2	Q96JW4	573 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SIGLEC10	Q96LC7	697 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TCF12	Q99081	682 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ULBP3	Q9BZM4	244 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SOHLH2	Q9NX45	425 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SEMA5B	Q9P283	1151 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CIDEB	Q9UHD4	219 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	POLG2	Q9UHN1	485 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TSR3	Q9UJK0	312 aa	Known RBP	13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ICK	Q9UPZ9	632 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CDYL	Q9Y232	598 aa		13.73	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LOC400499	M0QZD8	3231 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZCWPW2	A0A1B0GU75	182 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SLC9B1P1	A6NJY1	282 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	C2orf74	A8MZ97	194 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MATN2	O00339	956 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	NIPSNAP2	O75323	286 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	BANF1	O75531	89 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	USP1	O94782	785 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZBTB11	O95625	1053 aa	Predicted RBP	13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZNF28	P17035	718 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	WT1	P19544	449 aa	Predicted RBP	13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CHRM3	P20309	590 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	OGN	P20774	298 aa	Known RBP	13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PRDX3	P30048	256 aa	Known RBP	13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	HSD11B2	P80365	405 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CTBP1	Q13363	440 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TUBB3	Q13509	450 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	IL11RA	Q14626	422 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZNF789	Q5FWF6	425 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZNF470	Q6ECI4	717 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	UNC5A	Q6ZN44	842 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CENPU	Q71F23	418 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TMEM135	Q86UB9	458 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PPP1R3B	Q86XI6	285 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KMT5C	Q86Y97	462 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CILP2	Q8IUL8	1156 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	DENND6A	Q8IWF6	608 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ADGRF3	Q8IZF5	1079 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	UNC5B	Q8IZJ1	945 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	RUNDC3B	Q96NL0	473 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	BIRC8	Q96P09	236 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TRIM51	Q9BSJ1	452 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TRIM31	Q9BZY9	425 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SPRY4	Q9C004	299 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KLHL25	Q9H0H3	589 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PDE7B	Q9NP56	450 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ACTR10	Q9NZ32	417 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LNPEP	Q9UIQ6	1025 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	POMT2	Q9UKY4	750 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	RARRES3	Q9UL19	164 aa		13.72	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PIPSL	A2A3N6	862 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CCDC188	H7C350	402 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KPNA5	O15131	536 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TTI1	O43156	1089 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SPAG6	O75602	509 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KIAA0754	O94854	1291 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SLCO2B1	O94956	709 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TPBGL	P0DKB5	382 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	FGF5	P12034	268 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LIF	P15018	202 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PVR	P15151	417 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	IVD	P26440	423 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MAP4	P27816	1152 aa	Known RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CASQ1	P31415	396 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SHMT2	P34897	504 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ACY1	Q03154	408 aa		13.71	□□□□□ -0.21

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