RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 MMP27Q9H306 513 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 KCNK15Q9H427 330 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ZNF696Q9H7X3 374 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 HHATLQ9HCP6 504 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 SLC35C2Q9NQQ7 365 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ANKEF1Q9NU02 776 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 SLC38A7Q9NVC3 462 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 PTTG2Q9NZH5 202 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE2DQ9UEU5 116 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TCF19Q9Y242 345 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 JRKLQ9Y4A0 524 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 TTLL3Q9Y4R7 772 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 POGZQ7Z3K3 1410 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 ATP10BO94823 1461 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 KDM5CP41229 1560 aa3.32□□□□□ -1.88
SSBP2-206ENST00000506960 DNMT1P26358 1616 aaKnown RBP3.32□□□□□ -1.88
SSBP2-206ENST00000506960 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SAMD9Q5K651 1589 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 CDK13Q14004 1512 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PRAG1Q86YV5 1406 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SNED1Q8TER0 1413 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 GPR75-ASB3A0A0A6YYF3 556 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PRSS51A0A1B0GVH4 220 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 FAM72CH0Y354 149 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SH2B2O14492 632 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 P4HA2O15460 535 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SYNGR3O43761 229 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 EDIL3O43854 480 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SSX4O60224 188 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 GPR137BO60478 399 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 ERAL1O75616 437 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 TFAP2AP05549 437 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 CKMT2P17540 419 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 DNASE1P24855 282 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 GABRA5P31644 462 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 CDKN1AP38936 164 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 ARCN1P48444 511 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 MMP15P51511 669 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 RPS18P62269 152 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 UBXN2AP68543 259 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 CCDC6Q16204 474 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 FAM72AQ5TYM5 149 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 FAM72DQ6L9T8 149 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 KLC3Q6P597 504 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 C16orf54Q6UWD8 224 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PIWIL4Q7Z3Z4 852 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 TMEM173Q86WV6 379 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PTOV1Q86YD1 416 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 GUF1Q8N442 669 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SYT2Q8N9I0 419 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 POMGNT2Q8NAT1 580 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SLC24A4Q8NFF2 622 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PTPMT1Q8WUK0 201 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 TMCO6Q96DC7 493 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 ALG14Q96F25 216 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 PRMT6Q96LA8 375 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 DUX3Q96PT4 197 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 CCDC106Q9BWC9 280 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 MOV10L1Q9BXT6 1211 aaKnown RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SLA2Q9H6Q3 261 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 TBC1D17Q9HA65 648 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 STK26Q9P289 416 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 MORF4L1Q9UBU8 362 aa3.31□□□□□ -1.88
SSBP2-206ENST00000506960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 SPIN1Q9Y657 262 aaPredicted RBP3.31□□□□□ -1.88
SSBP2-206ENST00000506960 LRP6O75581 1613 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 TCOF1Q13428 1488 aaKnown RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 FHOD3Q2V2M9 1422 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 EP400Q96L91 3159 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 A0A0G2JNG1 304 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 SYNDIG1LA6NDD5 238 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 SYNCRIPO60506 623 aaKnown RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 WISP2O76076 250 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 IGHV4-39P01824 125 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 H1F0P07305 194 aaKnown RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 RPL24P83731 157 aaKnown RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE5Q13069 117 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 GAGE6Q13070 117 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 BAATQ14032 418 aaPredicted RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 KCTD2Q14681 263 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 KIR2DS5Q14953 304 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 FCN2Q15485 313 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 SNAPC1Q16533 368 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 DUOXA1Q1HG43 343 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 LETM2Q2VYF4 491 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 RAB6CQ53S08 254 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 NAA16Q6N069 864 aaPredicted RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 SLC30A6Q6NXT4 461 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 TEX38Q6PEX7 206 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 ADGRA1Q86SQ6 560 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 PRPF39Q86UA1 669 aaKnown RBP3.3□□□□□ -1.88
SSBP2-206ENST00000506960 CEP57Q86XR8 500 aa3.3□□□□□ -1.88
SSBP2-206ENST00000506960 FAM114A1Q8IWE2 563 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms