RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 DCDP81605 110 aaKnown RBP20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 ABRQ12979 859 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 ATP1A4Q13733 1029 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 LLGL1Q15334 1064 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 CYP2A13Q16696 494 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 SYTL3Q4VX76 610 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 MLIPQ5VWP3 458 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 TLDC1Q6P9B6 456 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 DARS2Q6PI48 645 aaKnown RBP20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 SPESP1Q6UW49 350 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 FAM198BQ6UWH4 519 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 TAS2R42Q7RTR8 314 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 VSTM4Q8IW00 320 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 OR52E1Q8NGJ3 308 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 DLG3Q92796 817 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 NACC2Q96BF6 587 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 TRAPPC9Q96Q05 1148 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 TBL1YQ9BQ87 522 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 NDC1Q9BTX1 674 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 NUDT9Q9BW91 350 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 ACTR10Q9NZ32 417 aa20.38■□□□□ 0.85
SQSTM1-210ENST00000506042 GOLGA6L9A6NEM1 432 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 KCNN4O15554 427 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 TJP3O95049 919 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 ST6GAL1P15907 406 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 MC4RP32245 332 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 MYBPC3Q14896 1274 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 PTCHD3Q3KNS1 767 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 ANKRD20A2Q5SQ80 823 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 ANKRD20A1Q5TYW2 823 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 ANKRD20A3Q5VUR7 823 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 MAMDC2Q7Z304 686 aaPredicted RBP20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 C19orf47Q8N9M1 422 aaKnown RBP20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 C5orf34Q96MH7 638 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 HGH1Q9BTY7 390 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 TSSK1BQ9BXA7 367 aa20.37■□□□□ 0.85
SQSTM1-210ENST00000506042 TCP11X1B4DZS4 312 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 PSMD3O43242 534 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 LDB2O43679 373 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 RPN2P04844 631 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 RBP3P10745 1247 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 ACRV1P26436 265 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 CYLC1P35663 651 aaPredicted RBP20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 PPARGP37231 505 aaPredicted RBP20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 NSG1P42857 185 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 PER3P56645 1201 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 EIF3EP60228 445 aaKnown RBP20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 TMPRSS15P98073 1019 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 FAM182AQ5T1J6 154 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 RHBDD2Q6NTF9 364 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 FBXO38Q6PIJ6 1188 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 ARHGEF18Q6ZSZ5 1173 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 MRGPREQ86SM8 312 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 ZBTB2Q8N680 514 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 PTERQ96BW5 349 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 HEMGNQ9BXL5 484 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 CHRNA10Q9GZZ6 450 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 OR52A5Q9H2C5 316 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 OR6C2Q9NZP2 312 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 SLC5A6Q9Y289 635 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 ASF1AQ9Y294 204 aa20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 PTRH2Q9Y3E5 179 aaKnown RBP20.36■□□□□ 0.85
SQSTM1-210ENST00000506042 ITGAXP20702 1163 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 PSMB4P28070 264 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 NAP1L1P55209 391 aaKnown RBP20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 XIAPP98170 497 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 CACNG1Q06432 222 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 BOP1Q14137 746 aaKnown RBP20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 PTPRCAPQ14761 206 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 EIF2S3LQ2VIR3 472 aaKnown RBP20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 SKOR2Q2VWA4 1001 aaPredicted RBP20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 CCDC170Q8IYT3 715 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 TBC1D21Q8IYX1 336 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 GALNT16Q8N428 558 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 TTC13Q8NBP0 860 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 OR13C4Q8NGS5 318 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 SLC22A18Q96BI1 424 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 SPATA13Q96N96 652 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 APOL2Q9BQE5 337 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 ARNT2Q9HBZ2 717 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 ATP13A2Q9NQ11 1180 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 INTS7Q9NVH2 962 aaKnown RBP20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 LUZP4Q9P127 313 aa20.35■□□□□ 0.85
SQSTM1-210ENST00000506042 BTN3A3O00478 584 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ZSCAN9O15535 394 aaPredicted RBP20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 LCA5LO95447 670 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 OR56A5P0C7T3 313 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ADRA1AP35348 466 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ZNF140P52738 457 aaPredicted RBP20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ARSFP54793 590 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 OTUD4Q01804 1114 aaKnown RBP20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ESPL1Q14674 2120 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 P3H1Q32P28 736 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 DCAF10Q5QP82 559 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 CDHR3Q6ZTQ4 885 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 SERPINA9Q86WD7 417 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 OR2Y1Q8NGV0 311 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 ACTL9Q8TC94 416 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 PPM1MQ96MI6 270 aa20.34■□□□□ 0.85
SQSTM1-210ENST00000506042 LRRC40Q9H9A6 602 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms