RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PISDQ9UG56 409 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 KLHL3Q9UH77 587 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 POLG2Q9UHN1 485 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 MED16Q9Y2X0 877 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 PCDHGA7Q9Y5G6 932 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 WDFY3Q8IZQ1 3526 aa17.73■□□□□ 0.43
PDLIM7-209ENST00000503346 OR6C74A6NCV1 312 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 A8MU76 341 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 B4E171 279 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 TLX3O43711 291 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 HAUS5O94927 633 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 CCL4P13236 92 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 ITIH1P19827 911 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 ATP5DP30049 168 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 ETV5P41161 510 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 TSPAN7P41732 249 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 CLCN7P51798 805 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 PLTPP55058 493 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 SLC7A5Q01650 507 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 PRKG2Q13237 762 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 TRADDQ15628 312 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 TEDDM1Q5T9Z0 273 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 IRGCQ6NXR0 463 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 CNSTQ6PJW8 725 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 UNC5DQ6UXZ4 953 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 OR4E2Q8NGC2 313 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 GSDMBQ8TAX9 411 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 FBXO25Q8TCJ0 367 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 CD180Q99467 661 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 AARSD1Q9BTE6 412 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 B3GNT4Q9C0J1 378 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 SRMSQ9H3Y6 488 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 ZNF768Q9H5H4 540 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 MOCS1Q9NZB8 636 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 IGF2RP11717 2491 aa17.72■□□□□ 0.43
PDLIM7-209ENST00000503346 E5RI56 91 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 AGRPO00253 132 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 NVLO15381 856 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 RPN2P04844 631 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 FGF3P11487 239 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 GABRB3P28472 473 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 PPP1CAP62136 330 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 ABRQ12979 859 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 AMIGO1Q86WK6 493 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 ZBTB2Q8N680 514 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 BMPERQ8N8U9 685 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 NOA1Q8NC60 698 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 KLHL6Q8WZ60 621 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 SAYSD1Q9NPB0 183 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 PPANQ9NQ55 473 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 GALPQ9UBC7 116 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 ICKQ9UPZ9 632 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 RAXQ9Y2V3 346 aa17.71■□□□□ 0.43
PDLIM7-209ENST00000503346 PIKFYVEQ9Y2I7 2098 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 EFCAB7A8K855 629 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 MATN2O00339 956 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 KIF1CO43896 1103 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 KDM1AO60341 852 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 AHSGP02765 367 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 TPBGLP0DKB5 382 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 SHMT2P34897 504 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 MAPK10P53779 464 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 MGAT5Q09328 741 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 PRKAA1Q13131 559 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 TTLL9Q3SXZ7 439 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 GLE1Q53GS7 698 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 ACSBG2Q5FVE4 666 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 CACHD1Q5VU97 1274 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 ARMC6Q6NXE6 501 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 FAM92BQ6ZTR7 304 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 DCUN1D3Q8IWE4 304 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 CEP112Q8N8E3 955 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 UBXN4Q92575 508 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 FAM136AQ96C01 138 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 TWSG1Q9GZX9 223 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 OCIAD1Q9NX40 245 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 ACSL6Q9UKU0 697 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 PCDHGA3Q9Y5H0 932 aa17.7■□□□□ 0.42
PDLIM7-209ENST00000503346 ESYT3A0FGR9 886 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 TLCD2A6NGC4 264 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 SRRM3A6NNA2 597 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 C9orf172C9J069 976 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 BTN3A3O00478 584 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 BTN3A1O00481 513 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 RASSF9O75901 435 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 POLR2CP19387 275 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 EIF2S3P41091 472 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 PCBP4P57723 403 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 MC2RQ01718 297 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 GUCY2DQ02846 1103 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 FAM129CQ86XR2 697 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 ADGRF3Q8IZF5 1079 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 CARFQ8N187 725 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 SIDT2Q8NBJ9 832 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 CFAP61Q8NHU2 1237 aa17.69■□□□□ 0.42
PDLIM7-209ENST00000503346 USP7Q93009 1102 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms