RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PTBP2	Q9UKA9	531 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	PCOLCE2	Q9UKZ9	415 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	KCNK6	Q9Y257	313 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	DNAJC16	Q9Y2G8	782 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	GPSM3	Q9Y4H4	160 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	KMT2E	Q8IZD2	1858 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	SUPT3H	B4E1H0	165 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	TLR4	O00206	839 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	VILL	O15195	856 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	TAPBP	O15533	448 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	H2AFY	O75367	372 aa	Known RBP	11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	SUPT3H	O75486	399 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	RASGRP1	O95267	797 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	C1orf105	O95561	183 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	RPS17	P08708	135 aa	Known RBP	11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	SP9	P0CG40	484 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	VCL	P18206	1134 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	IMPDH1	P20839	514 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	GRK2	P25098	689 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	CNR2	P34972	360 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	ALDH18A1	P54886	795 aa	Known RBP	11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	AP1S2	P56377	157 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	NXPH1	P58417	271 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	CTBS	Q01459	385 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	ABR	Q12979	859 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	SETDB1	Q15047	1291 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.85	□□□□□ -0.51	3e-6	■■■■□ 20.3
MATR3-231	ENST00000502394	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	UNC50	Q53HI1	259 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	ZNF678	Q5SXM1	525 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	LYSMD4	Q5XG99	296 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	LAYN	Q6UX15	382 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	UNC5D	Q6UXZ4	953 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	PARG	Q86W56	976 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	PHACTR4	Q8IZ21	702 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	FBXO39	Q8N4B4	442 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	GPBAR1	Q8TDU6	330 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	LRRC8C	Q8TDW0	803 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	RHBDF1	Q96CC6	855 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	PHF21B	Q96EK2	531 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	TMEM79	Q9BSE2	394 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	C20orf27	Q9GZN8	174 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	GSTO2	Q9H4Y5	243 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	SLCO1B3	Q9NPD5	702 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	ZSCAN32	Q9NX65	697 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	MOSPD1	Q9UJG1	213 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	WDR37	Q9Y2I8	494 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	THADA	Q6YHU6	1953 aa		11.85	□□□□□ -0.51
MATR3-231	ENST00000502394	LRRC14B	A6NHZ5	514 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	TMEM114	B3SHH9	223 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	TCP11X1	B4DZS4	312 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	RNF223	E7ERA6	249 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	MYO1C	O00159	1063 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	BCAT2	O15382	392 aa	Predicted RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ITM2A	O43736	263 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	NPHS1	O60500	1241 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	EDF1	O60869	148 aa	Known RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	TNF	P01375	233 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CAT	P04040	527 aa	Known RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CSF2	P04141	144 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	NME1	P15531	152 aa	Known RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CYP2A7	P20853	494 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	DRD4	P21917	467 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	IDS	P22304	550 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ITPKA	P23677	461 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	AK4	P27144	223 aa	Predicted RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	GGT5	P36269	586 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	SERPINB5	P36952	375 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	BDKRB1	P46663	353 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	RPIA	P49247	311 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	SEC24C	P53992	1094 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	NAGLU	P54802	743 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	HERVK_113	P63132	956 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ASPH	Q12797	758 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	STX3	Q13277	289 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	GRB7	Q14451	532 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ANGPT1	Q15389	498 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	PFKFB4	Q16877	469 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	UAP1L1	Q3KQV9	507 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CCSMST1	Q4G0I0	132 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ATG16L1	Q676U5	607 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	SULT1C3	Q6IMI6	304 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ABRAXAS1	Q6UWZ7	409 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	MBOAT1	Q6ZNC8	495 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	FRA10AC1	Q70Z53	315 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ARMCX6	Q7L4S7	300 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	HID1	Q8IV36	788 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	KLHDC8A	Q8IYD2	350 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	LRRC34	Q8IZ02	419 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	LSMEM2	Q8N112	164 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CCL4L1	Q8NHW4	92 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	EXT2	Q93063	718 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	FBXL8	Q96CD0	374 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	MOCOS	Q96EN8	888 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	CHMP6	Q96FZ7	201 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	C7orf26	Q96N11	449 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	INSM2	Q96T92	566 aa	Predicted RBP	11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	SORT1	Q99523	831 aa		11.84	□□□□□ -0.51
MATR3-231	ENST00000502394	ERVK-6	Q9BXR3	956 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms