RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 BBS7Q8IWZ6 715 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CLHC1Q8NHS4 586 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ZBTB18Q99592 522 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 NTMT1Q9BV86 223 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 DPY30Q9C005 99 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 HIPK3Q9H422 1215 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ATP13A3Q9H7F0 1226 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SLC6A13Q9NSD5 602 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 TRPS1Q9UHF7 1281 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 UTS2RQ9UKP6 389 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SLC28A1O00337 649 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 AREL1O15033 823 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SEC22BO75396 215 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 DEAF1O75398 565 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ALPLP05186 524 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 PGRP06401 933 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 EBLN1P0CF75 366 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 EPB42P16452 691 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 EPORP19235 508 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 AKT1P31749 480 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 MTHFRP42898 656 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 GNPDA1P46926 289 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 STK19P49842 368 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ALDH3A2P51648 485 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 IST1P53990 364 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 EPHB3P54753 998 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ESRRGP62508 458 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 PMS2P3Q13401 168 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 BIRC2Q13490 618 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 RAB33AQ14088 237 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ARHGEF7Q14155 803 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 IMPG1Q17R60 797 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 SLC44A4Q53GD3 710 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 LYPLAL1Q5VWZ2 237 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CRTC1Q6UUV9 634 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 RNF165Q6ZSG1 346 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 RFLNAQ6ZTI6 216 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 GPR180Q86V85 440 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 FBXO30Q8TB52 745 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 USP7Q93009 1102 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ACDQ96AP0 544 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 C12orf43Q96C57 262 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 MTFMTQ96DP5 389 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 THUMPD3Q9BV44 507 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CLMPQ9H6B4 373 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 RDH14Q9HBH5 336 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 LRTM1Q9HBL6 345 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 CREBZFQ9NS37 354 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 ZNHIT2Q9UHR6 403 aa9.65□□□□□ -0.86
CLIP1-204ENST00000501271 INTS6Q9UL03 887 aaKnown RBP9.65□□□□□ -0.86
CLIP1-204ENST00000501271 DOCK6Q96HP0 2047 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 AGAP14A8MT82 685 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 H0YAE9 185 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 TMX2-CTNND1H3BSU7 103 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 NRG2O14511 850 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 WDR47O94967 919 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 IGSF6O95976 241 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ALBP02768 609 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ELK4P28324 431 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SHMT2P34897 504 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CSNK1DP48730 415 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 B4GALNT1Q00973 533 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CHRNB3Q05901 458 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 MAD2L1Q13257 205 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 DAG1Q14118 895 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 RAB39AQ14964 217 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ZXDCQ2QGD7 858 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 GPR33Q49SQ1 333 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 USP39Q53GS9 565 aaKnown RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CACHD1Q5VU97 1274 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 GRAMD4Q6IC98 578 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ULK4Q96C45 1275 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 TMEM169Q96HH4 297 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 MUS81Q96NY9 551 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 C19orf43Q9BQ61 176 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 TBCDQ9BTW9 1192 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ACPTQ9BZG2 426 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 GORASP2Q9H8Y8 452 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 MBD1Q9UIS9 605 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 TRBV5-3A0A0A0MS03 114 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CLGNO14967 610 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 B4GAT1O43505 415 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 BNIP3LO60238 219 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 STK16O75716 305 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 IL6P05231 212 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 LHCGRP22888 699 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SERPINA4P29622 427 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CCR7P32248 378 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 MAPK8P45983 427 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 EMP3P54852 163 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 PHC1P78364 1004 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 LAPTM5Q13571 262 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 CPSF6Q16630 551 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLIP1-204ENST00000501271 SMU1Q2TAY7 513 aa9.64□□□□□ -0.87
CLIP1-204ENST00000501271 PLEKHG6Q3KR16 790 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms