RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PRPH2P23942 346 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 GNPDA1P46926 289 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 LIMK2P53671 638 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 IFI35P80217 286 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ADIGQ0VDE8 80 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 PTGR1Q14914 329 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 DPYSL2Q16555 572 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 PDK4Q16654 411 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF574Q6ZN55 896 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TMED4Q7Z7H5 227 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF619Q8N2I2 560 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 GLB1L3Q8NCI6 653 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CENPNQ96H22 339 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TMEM165Q9HC07 324 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 COL6A1P12109 1028 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TMEM86AQ8N2M4 240 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CPSF7Q8N684 471 aaKnown RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 OXER1Q8TDS5 423 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 RSC1A1Q92681 617 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 POLR2J2Q9GZM3 115 aaKnown RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 PON1P27169 355 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 NFKB2Q00653 900 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 RIN1Q13671 783 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 LRRC57Q8N9N7 239 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 C8orf48Q96LL4 319 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 SPATA13Q96N96 652 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 MCMBPQ9BTE3 642 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 SDHAF3Q9NRP4 125 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF16P17020 682 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 GSTM3P21266 225 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TAS2R39P59534 338 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 HTD2P86397 168 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 AVL9Q8NBF6 648 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 AARSD1Q9BTE6 412 aaKnown RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 NDC1Q9BTX1 674 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TBX1O43435 398 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CTNNB1P35222 781 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 MAGEA11P43364 429 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 MVKQ03426 396 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF169Q14929 603 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 SGCBQ16585 318 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TFAP2DQ7Z6R9 452 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 UBQLNLQ8IYU4 475 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CHAC2Q8WUX2 184 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 FN3KQ9H479 309 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CXorf21Q9HAI6 301 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 MUSKO15146 869 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 FGF1P05230 155 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 ADRA1DP25100 572 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 PSPHP78330 225 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 NTRK2Q16620 822 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 RNF38Q9H0F5 515 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 TDRD3Q9H7E2 651 aaKnown RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 MRM3Q9HC36 420 aaKnown RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 POLD4Q9HCU8 107 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 RLIMQ9NVW2 624 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 ABHD2P08910 425 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 PAEPP09466 180 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 UGT1A3P35503 534 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 RAB30Q15771 203 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 SLC41A1Q8IVJ1 513 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 PTGR2Q8N8N7 351 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 VANGL1Q8TAA9 524 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 CADM1Q9BY67 442 aaKnown RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 MKKSQ9NPJ1 570 aaPredicted RBP11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 SLC7A8Q9UHI5 535 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 HSPB11Q9Y547 144 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 GLI2P10070 1586 aa11.02□□□□□ -0.64
AC055713.1-201ENST00000498967 KHNYNO15037 678 aaKnown RBP11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 TFEBP19484 476 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 HCAR3P49019 387 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 RAB5CP51148 216 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 NAE1Q13564 534 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 MTMR2Q13614 643 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 SCARB2Q14108 478 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 PCK2Q16822 640 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 TOR1AIP1Q5JTV8 583 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 SHC4Q6S5L8 630 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 TC2NQ8N9U0 490 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 XAGE5Q8WWM1 108 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 COPZ2Q9P299 210 aa11.02□□□□□ -0.65
AC055713.1-201ENST00000498967 GRID2O43424 1007 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms