RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	SEC31A	O94979	1220 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	HEXIM1	O94992	359 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	SLU7	O95391	586 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	PIRT	P0C851	137 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	CYP2A6	P11509	494 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	NFKBIA	P25963	317 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	HNF1B	P35680	557 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	GRIA1	P42261	906 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	RPL21	P46778	160 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ITGA8	P53708	1063 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	FAM193A	P78312	1265 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	SARNP	P82979	210 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	SEMG2	Q02383	582 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	GUCY2D	Q02846	1103 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ELP6	Q0PNE2	266 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	CDH17	Q12864	832 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	OVGP1	Q12889	678 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ZNF267	Q14586	743 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	MORF4L2	Q15014	288 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	PTPRR	Q15256	657 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ZNF284	Q2VY69	593 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	TEX35	Q5T0J7	233 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	KIAA0895L	Q68EN5	471 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	HIBCH	Q6NVY1	386 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ZNF534	Q76KX8	674 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	DPPA4	Q7L190	304 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	IQCH	Q86VS3	1027 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	HOOK3	Q86VS8	718 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	BBOF1	Q8ND07	529 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	OR52K1	Q8NGK4	314 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	NRG4	Q8WWG1	115 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	BIRC7	Q96CA5	298 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	WDR92	Q96MX6	357 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	PWWP2A	Q96N64	755 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	LENG8	Q96PV6	779 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	SMIM14	Q96QK8	99 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	LYSMD1	Q96S90	227 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	DPH5	Q9H2P9	285 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	C6orf106	Q9H6K1	298 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ARNT2	Q9HBZ2	717 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	MAGEE1	Q9HCI5	957 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	CASS4	Q9NQ75	786 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	PIH1D1	Q9NWS0	290 aa	Known RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ANAPC5	Q9UJX4	755 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	SHOC2	Q9UQ13	582 aa		7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.34	□□□□□ -1.23
GARNL3-222	ENST00000498801	CACNA1I	Q9P0X4	2223 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801		A0A1B0GTW7	788 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	FAM47DP	A6NHR8	397 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801		A8MX80	341 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	GOLGA8M	H3BSY2	632 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	AP3B1	O00203	1094 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TP73	O15350	636 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	LY86	O95711	162 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	RHOXF2B	P0C7M4	288 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	MLN	P12872	115 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TPH1	P17752	444 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	LHCGR	P22888	699 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	AFF3	P51826	1226 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	DRG2	P55039	364 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	SESN2	P58004	480 aa	Predicted RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	PPP2CB	P62714	309 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	RPS21	P63220	83 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	PPP2CA	P67775	309 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TUBB4B	P68371	445 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CD69	Q07108	199 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	RALGDS	Q12967	914 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CALCOCO2	Q13137	446 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TRADD	Q15628	312 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CDKN3	Q16667	212 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TMEM52B	Q4KMG9	183 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	LRRC66	Q68CR7	880 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	LRRC8B	Q6P9F7	803 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CRTC1	Q6UUV9	634 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	ATG14	Q6ZNE5	492 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TSPAN33	Q86UF1	283 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CAND1	Q86VP6	1230 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	HORMAD1	Q86X24	394 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	DNAAF3	Q8N9W5	541 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	MCU	Q8NE86	351 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	BLOC1S5	Q8TDH9	187 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	CXorf40A	Q8TE69	158 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	SERPINB12	Q96P63	405 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TAAR9	Q96RI9	348 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	RHOXF2	Q9BQY4	288 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	WRAP53	Q9BUR4	548 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	ADI1	Q9BV57	179 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	GPR174	Q9BXC1	333 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	TRABD	Q9H4I3	376 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	EPB41L5	Q9HCM4	733 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	XAB2	Q9HCS7	855 aa	Known RBP	7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	PARD6A	Q9NPB6	346 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	SEMA4G	Q9NTN9	838 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	GRHL1	Q9NZI5	618 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	HACD3	Q9P035	362 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	NTM	Q9P121	344 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	NCDN	Q9UBB6	729 aa		7.33	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZNF711	Q9Y462	761 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms