RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 UCKL1Q9NWZ5 548 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 WDR37Q9Y2I8 494 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 TMEM131Q92545 1883 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 SYCE1LA8MT33 242 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 NUDT21O43809 227 aaKnown RBP19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 C1orf105O95561 183 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 CYP2A7P20853 494 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 CSHL1Q14406 222 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 ZNF460Q14592 562 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 NR1D2Q14995 579 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 CCDC153Q494R4 210 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 C14orf28Q4W4Y0 310 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 PPM1JQ5JR12 505 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 PRAMEF14Q5SWL7 426 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 METTL2BQ6P1Q9 378 aaKnown RBP19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 MAPK15Q8TD08 544 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 FAM136AQ96C01 138 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 NXNL1Q96CM4 212 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 APOPT1Q96IL0 206 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 C12orf66Q96MD2 445 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 EDEM2Q9BV94 578 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 TWSG1Q9GZX9 223 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 TRIT1Q9H3H1 467 aaKnown RBP19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 EPB41L1Q9H4G0 881 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 IL21RQ9HBE5 538 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 ZNF624Q9P2J8 865 aaPredicted RBP19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 MID2Q9UJV3 735 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 ASF1AQ9Y294 204 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 OARD1Q9Y530 152 aa19.25■□□□□ 0.67
SCAMP3-209ENST00000497470 COL5A1P20908 1838 aaPredicted RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 MYO1CO00159 1063 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 COPEO14579 308 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 PRPF4O43172 522 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 ZW10O43264 779 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 TYROBPO43914 113 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 KERAO60938 352 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 CELA2BP08218 269 aaPredicted RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 RPL10P27635 214 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 SLC19A1P41440 591 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 GPR3P46089 330 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 DLG1Q12959 904 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 PPP1R3AQ16821 1122 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 SBSNQ6UWP8 590 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 PIWIL4Q7Z3Z4 852 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 ZNF438Q7Z4V0 828 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 SRRM1Q8IYB3 904 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 HMGCLL1Q8TB92 370 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 RDH11Q8TC12 318 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 GTPBP2Q9BX10 602 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 MRPL46Q9H2W6 279 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 SLC40A1Q9NP59 571 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 PARD6AQ9NPB6 346 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 SPATA7Q9P0W8 599 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 CPNE7Q9UBL6 633 aa19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 RUVBL2Q9Y230 463 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 ARHGEF17Q96PE2 2063 aaPredicted RBP19.24■□□□□ 0.67
SCAMP3-209ENST00000497470 LILRA5A6NI73 299 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 ZNF839A8K0R7 811 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TM9SF1O15321 606 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SNX2O60749 519 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SDC3O75056 442 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 HIST1H2AGP0C0S8 130 aaPredicted RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 ERGP11308 486 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 GLB1P16278 677 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 HIST1H2ADP20671 130 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 MAP4P27816 1152 aaKnown RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 HNMTP50135 292 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 DUSP3P51452 185 aaPredicted RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 EPHA4P54764 986 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SF3A2Q15428 464 aaKnown RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TCEAL6Q6IPX3 200 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 NAPRTQ6XQN6 538 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TCAIMQ8N3R3 496 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SPDYE1Q8NFV5 336 aaPredicted RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SLC37A2Q8TED4 501 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 KCTD4Q8WVF5 259 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 ATL1Q8WXF7 558 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 NAT6Q93015 286 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TCEAL3Q969E4 200 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 CXorf40BQ96DE9 158 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 HIST1H2AHQ96KK5 128 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 CCDC138Q96M89 665 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 ATOH8Q96SQ7 321 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 HIST1H2AJQ99878 128 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 H2AFJQ9BTM1 129 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SMOC1Q9H4F8 434 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 PCMTD2Q9NV79 361 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 SCHIP1Q9P0W5 487 aaPredicted RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 PLLPQ9Y342 182 aa19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TDRD6O60522 2096 aaKnown RBP19.23■□□□□ 0.67
SCAMP3-209ENST00000497470 TARM1B6A8C7 271 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 BTN3A1O00481 513 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 KLK8O60259 260 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 EML2O95834 649 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 VIPP01282 170 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 TFEBP19484 476 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 NAA20P61599 178 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 ABRQ12979 859 aa19.22■□□□□ 0.67
SCAMP3-209ENST00000497470 CCDC6Q16204 474 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms