RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 HPS4Q9NQG7 708 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 EIF3LQ9Y262 564 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 CEP290O15078 2479 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 WDR47O94967 919 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 KCNH1O95259 989 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 TCF3P15923 654 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PRKACGP22612 351 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 SLC5A2P31639 672 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RFC2P35250 354 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CCR2P41597 374 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 EMX2Q04743 252 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RBBP5Q15291 538 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 NEDD8Q15843 81 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 GPRC6AQ5T6X5 926 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 B3GNT6Q6ZMB0 384 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 LPCAT2Q7L5N7 544 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RNF168Q8IYW5 571 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ZBTB18Q99592 522 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CARS2Q9HA77 564 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CLK4Q9HAZ1 481 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PARVBQ9HBI1 364 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 KIAA1522Q9P206 1035 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 SLC22A14Q9Y267 594 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 DLGAP4Q9Y2H0 992 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 K7EPI3 171 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ACOX3O15254 700 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RGS14O43566 566 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PDYNP01213 254 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 MYCLP1P12525 358 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 TACR1P25103 407 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ELK4P28324 431 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PBLDP30039 288 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RPS9P46781 194 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 VEGFBP49765 207 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 RPL26P61254 145 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 B4GALNT1Q00973 533 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 LSAMPQ13449 338 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 APOFQ13790 326 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 Q6ZNB5 142 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 C10orf111Q8N326 155 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PNPT1Q8TCS8 783 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ANKRD60Q9BZ19 345 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 SMURF2Q9HAU4 748 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 EXD2Q9NVH0 621 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 VPS4AQ9UN37 437 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 OARD1Q9Y530 152 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CAPNS1P04632 268 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PGRP06401 933 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 CCL5P13501 91 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 HALP42357 657 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 GNPDA1P46926 289 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ADARP55265 1226 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 SNRPD1P62314 119 aaKnown RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ZXDCQ2QGD7 858 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 AASDHQ4L235 1098 aaPredicted RBP11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 FAM162AQ96A26 154 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ACDQ96AP0 544 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 HAUS8Q9BT25 410 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ADNPQ9H2P0 1102 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 ADGRE2Q9UHX3 823 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
CDCA7-208ENST00000496441 PABPN1LA6NDY0 278 aaKnown RBP11.28□□□□□ -0.6
CDCA7-208ENST00000496441 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
CDCA7-208ENST00000496441 CXCL14O95715 111 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 GPIP06744 558 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 ANXA5P08758 320 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
CDCA7-208ENST00000496441 CDH2P19022 906 aaPredicted RBP11.28□□□□□ -0.6
CDCA7-208ENST00000496441 MTHFRP42898 656 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 ABRQ12979 859 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 PTCHD3Q3KNS1 767 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 MPPE1Q53F39 396 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 CACHD1Q5VU97 1274 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 Q6ZVL8 140 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 LILRA3Q8N6C8 439 aaPredicted RBP11.28□□□□□ -0.6
CDCA7-208ENST00000496441 PDPRQ8NCN5 879 aa11.28□□□□□ -0.6
CDCA7-208ENST00000496441 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms