RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MTRRQ9UBK8 725 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 GAGE2DQ9UEU5 116 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 DDX25Q9UHL0 483 aaKnown RBP3.54□□□□□ -1.84
CLK1-214ENST00000496205 DLGAP4Q9Y2H0 992 aa3.54□□□□□ -1.84
CLK1-214ENST00000496205 A0A1W2PPQ1 181 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 DENND3A2RUS2 1198 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 CTAGE9A4FU28 777 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 PSMA7O14818 248 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 CLIC2O15247 247 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 PRSS2P07478 247 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 CTAGE8P0CG41 777 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 FCGR1AP12314 374 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 FDPSP14324 419 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 STMN1P16949 149 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 GM2AP17900 193 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 POLR2CP19387 275 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 CD22P20273 847 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 SP100P23497 879 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 PTPN3P26045 913 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 TNNT3P45378 269 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 TPD52P55327 224 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 TUBA1BP68363 451 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 RBPJQ06330 500 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 BFSP1Q12934 665 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 HLFQ16534 295 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 GCNT6Q5T4J0 391 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 OR7E24Q6IFN5 339 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 PLBD1Q6P4A8 553 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 ZNF449Q6P9G9 518 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 FAM198BQ6UWH4 519 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 TMPRSS11BQ86T26 416 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 CTAGE4Q8IX94 777 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 OR8H3Q8N146 312 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 CRYBG2Q8N1P7 616 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 TEX9Q8N6V9 391 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 ARL10Q8N8L6 244 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 MAGEC3Q8TD91 643 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 DNAAF4Q8WXU2 420 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 FIG4Q92562 907 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 DAZLQ92904 295 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 CCDC47Q96A33 483 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 OXNAD1Q96HP4 312 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 JAKMIP1Q96N16 626 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 GPATCH1Q9BRR8 931 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 MOV10L1Q9BXT6 1211 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 C2orf40Q9H1Z8 148 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 GRPEL1Q9HAV7 217 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 SDF2L1Q9HCN8 221 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 XAB2Q9HCS7 855 aaKnown RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 TRPC7Q9HCX4 862 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 SLC24A2Q9UI40 661 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 GTF3C4Q9UKN8 822 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 ODF2LQ9ULJ1 636 aa3.53□□□□□ -1.84
CLK1-214ENST00000496205 SPIN1Q9Y657 262 aaPredicted RBP3.53□□□□□ -1.84
CLK1-214ENST00000496205 GPRASP1Q5JY77 1395 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 PRR23AA6NEV1 266 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 HNRNPCL2B2RXH8 293 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 H0Y626 953 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 MEIS2O14770 477 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ZNHIT1O43257 154 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 BMP10O95393 424 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 TGDSO95455 350 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ACSL3O95573 720 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ATP5BP06576 529 aaKnown RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 SP1P08047 785 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 KRT19P08727 400 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 OR2T7P0C7T2 308 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 CDH1P12830 882 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 TCF4P15884 667 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ERCC2P18074 760 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 PCGF2P35227 344 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 KRT2P35908 639 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ARCN1P48444 511 aaKnown RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 FUT6P51993 359 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 RBP5P82980 135 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 HSPB3Q12988 150 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 PLA2G7Q13093 441 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 SNTA1Q13424 505 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 GTF2H2Q13888 395 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 PTPRCAPQ14761 206 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 LBHQ53QV2 105 aaPredicted RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 PLA2G4FQ68DD2 849 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 GTF2H2CQ6P1K8 395 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 FAM171BQ6P995 826 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ZBTB49Q6ZSB9 765 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 MFSD6Q6ZSS7 791 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ERN2Q76MJ5 926 aaKnown RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 ERC1Q8IUD2 1116 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 FAM219AQ8IW50 185 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 UNC45BQ8IWX7 931 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 LMNTD2Q8IXW0 634 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 PAPD5Q8NDF8 572 aaKnown RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 OR8H1Q8NGG4 311 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 MR1Q95460 341 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 SPSB1Q96BD6 273 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms