RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 STEAP4Q687X5 459 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ARMC6Q6NXE6 501 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ZNF549Q6P9A3 640 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 KLHL35Q6PF15 583 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ZDHHC24Q6UX98 284 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 PALM2Q8IXS6 379 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 LMNTD2Q8IXW0 634 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 CEP112Q8N8E3 955 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 SIDT2Q8NBJ9 832 aaKnown RBP9.56□□□□□ -0.88
CALD1-223ENST00000496024 C2CD4AQ8NCU7 369 aaPredicted RBP9.56□□□□□ -0.88
CALD1-223ENST00000496024 AGBL5Q8NDL9 886 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ACVR1CQ8NER5 493 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 OR52E1Q8NGJ3 308 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 GABPB2Q8TAK5 448 aaPredicted RBP9.56□□□□□ -0.88
CALD1-223ENST00000496024 ZFPM2Q8WW38 1151 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ZDHHC12Q96GR4 267 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 PRR11Q96HE9 360 aaPredicted RBP9.56□□□□□ -0.88
CALD1-223ENST00000496024 NAF1Q96HR8 494 aaKnown RBP9.56□□□□□ -0.88
CALD1-223ENST00000496024 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 NDNQ99608 321 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 SRMSQ9H3Y6 488 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 MVB12BQ9H7P6 319 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 ZMIZ1Q9ULJ6 1067 aa9.56□□□□□ -0.88
CALD1-223ENST00000496024 SNRNP200O75643 2136 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 TMEM8BA6NDV4 472 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 OR5K3A6NET4 321 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 EFCAB7A8K855 629 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 TAF4O00268 1085 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 BTN3A3O00478 584 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 EIF3HO15372 352 aaKnown RBP eCLIP9.55□□□□□ -0.88
CALD1-223ENST00000496024 TLX3O43711 291 aaPredicted RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 SLCO2B1O94956 709 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 AHSGP02765 367 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 CAPNS1P04632 268 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 GABRB3P28472 473 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 BDKRB1P46663 353 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 ADARP55265 1226 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 MGAT5Q09328 741 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 PRKAA1Q13131 559 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 TRA2AQ13595 282 aaKnown RBP eCLIP9.55□□□□□ -0.88
CALD1-223ENST00000496024 DNTTIP2Q5QJE6 756 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 PLEKHS1Q5SXH7 462 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 RBM20Q5T481 1227 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 TEDDM1Q5T9Z0 273 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 FBXO38Q6PIJ6 1188 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 ARHGAP22Q7Z5H3 698 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 OOSP2Q86WS3 158 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 TBC1D21Q8IYX1 336 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 LSMEM2Q8N112 164 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 C2orf73Q8N5S3 287 aaPredicted RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 ZBTB2Q8N680 514 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 LMNTD1Q8N9Z9 388 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 IFT81Q8WYA0 676 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 RNF31Q96EP0 1072 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 PPM1MQ96MI6 270 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 SLC46A1Q96NT5 459 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 DCBLD2Q96PD2 775 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 GPR21Q99679 349 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 SLC30A3Q99726 388 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 MAP3K3Q99759 626 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 AARSD1Q9BTE6 412 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 ASCL3Q9NQ33 180 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 THSD1Q9NS62 852 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 OCIAD1Q9NX40 245 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 ZFATQ9P243 1243 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 PDP2Q9P2J9 529 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 RAXQ9Y2V3 346 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 PCDHGA8Q9Y5G5 932 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 NFS1Q9Y697 457 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 SPTBP11277 2137 aa9.55□□□□□ -0.88
CALD1-223ENST00000496024 MN1Q10571 1320 aaPredicted RBP9.55□□□□□ -0.88
CALD1-223ENST00000496024 DSPP15924 2871 aaKnown RBP9.54□□□□□ -0.88
CALD1-223ENST00000496024 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 KRT87PA6NCN2 255 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 BTN3A1O00481 513 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 HGSO14964 777 aaPredicted RBP9.54□□□□□ -0.88
CALD1-223ENST00000496024 VPS26AO75436 327 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 C9P02748 559 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 FGF3P11487 239 aaPredicted RBP9.54□□□□□ -0.88
CALD1-223ENST00000496024 SAT1P21673 171 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 MCM3P25205 808 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 MAGEA4P43358 317 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 ARL4DP49703 201 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 CLCN7P51798 805 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 KPNA2P52292 529 aaKnown RBP9.54□□□□□ -0.88
CALD1-223ENST00000496024 PGGT1BP53609 377 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 EIF3IQ13347 325 aaKnown RBP9.54□□□□□ -0.88
CALD1-223ENST00000496024 KLHL38Q2WGJ6 581 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 TBC1D25Q3MII6 688 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 TTLL9Q3SXZ7 439 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 TTC23LQ6PF05 361 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 STRA8Q7Z7C7 330 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 AMIGO1Q86WK6 493 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 PROSER1Q86XN7 944 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 CNTN4Q8IWV2 1026 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 CPNE9Q8IYJ1 553 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 GPATCH11Q8N954 259 aa9.54□□□□□ -0.88
CALD1-223ENST00000496024 KDF1Q8NAX2 398 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms