RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 GOLGA8KD6RF30 607 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 GOLGA8TH3BQL2 631 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 KDM1AO60341 852 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 PRAMEF10O60809 474 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 RASSF9O75901 435 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 SEC31AO94979 1220 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 TUBB4AP04350 444 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 UCNP55089 124 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 HSPA14Q0VDF9 509 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 CBLBQ13191 982 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 BRD3Q15059 726 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 TMED2Q15363 201 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 DCAF12Q5T6F0 453 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 CACHD1Q5VU97 1274 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 DUS1LQ6P1R4 473 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 CYB5D1Q6P9G0 228 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 CENPUQ71F23 418 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 FAM129CQ86XR2 697 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 KMT5CQ86Y97 462 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 BBOF1Q8ND07 529 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 OR4E2Q8NGC2 313 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 GABPB2Q8TAK5 448 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 TRIM56Q9BRZ2 755 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 TRIT1Q9H3H1 467 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 LATS2Q9NRM7 1088 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 OCIAD1Q9NX40 245 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 CDYLQ9Y232 598 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
MRPL55-233ENST00000495899 ZFC3H1O60293 1989 aaKnown RBP12.03□□□□□ -0.48
MRPL55-233ENST00000495899 UBA6A0AVT1 1052 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 OR6C74A6NCV1 312 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 IQCF5A8MTL0 148 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 EFCAB8A8MWE9 144 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 AGRPO00253 132 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 S1PR4O95977 384 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 RPN2P04844 631 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 NELFEP18615 380 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 FMO4P31512 558 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 ABCG1P45844 678 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 EIF3BP55884 814 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 TLE3Q04726 772 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 DHX9Q08211 1270 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 PRKAA1Q13131 559 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 IL11RAQ14626 422 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 SPANXN3Q5MJ09 141 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 PLEKHS1Q5SXH7 462 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 BROXQ5VW32 411 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 ZNF470Q6ECI4 717 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 UNC5DQ6UXZ4 953 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 FAM92BQ6ZTR7 304 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 OTOAQ7RTW8 1153 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 ZNF572Q7Z3I7 529 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 AMIGO1Q86WK6 493 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 SPACA3Q8IXA5 215 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 KRT222Q8N1A0 295 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 OR52E1Q8NGJ3 308 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 OR5K2Q8NHB8 316 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 GSDMBQ8TAX9 411 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 HNRNPLLQ8WVV9 542 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 JPH3Q8WXH2 748 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 ART4Q93070 314 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 SLC41A2Q96JW4 573 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 ERP44Q9BS26 406 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.49
MRPL55-233ENST00000495899 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 COMMD10Q9Y6G5 202 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 UNC13CQ8NB66 2214 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 APC2O95996 2303 aa12.02□□□□□ -0.49
MRPL55-233ENST00000495899 TLCD2A6NGC4 264 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 POLR1CO15160 346 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-233ENST00000495899 TP73O15350 636 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 KLK10O43240 276 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 LIPCP11150 499 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 PKMP14618 531 aaKnown RBP12.01□□□□□ -0.49
MRPL55-233ENST00000495899 ITGB6P18564 788 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 ITPKBP27987 946 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 ATP5DP30049 168 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 SHMT2P34897 504 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 ITGA8P53708 1063 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 ARL4CP56559 192 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 HSD11B2P80365 405 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 PRKG2Q13237 762 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 CRYMQ14894 314 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 HIF1AQ16665 826 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 BBS9Q3SYG4 887 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 CTSL3PQ5NE16 218 aa12.01□□□□□ -0.49
MRPL55-233ENST00000495899 DNTTIP2Q5QJE6 756 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms