RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 BEST2Q8NFU1 509 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 CPT1CQ8TCG5 803 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 ZNF296Q8WUU4 475 aaPredicted RBP9.18□□□□□ -0.94
RPSA-209ENST00000495394 USP7Q93009 1102 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 MR1Q95460 341 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 TMEM143Q96AN5 459 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 LRIG1Q96JA1 1093 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 TWNKQ96RR1 684 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 FAM213AQ9BRX8 229 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 PPA2Q9H2U2 334 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 SMYD3Q9H7B4 428 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 ARMT1Q9H993 441 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 RGS18Q9NS28 235 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 RBAKQ9NYW8 714 aaPredicted RBP9.18□□□□□ -0.94
RPSA-209ENST00000495394 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 MORF4L1Q9UBU8 362 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 RPL26L1Q9UNX3 145 aaKnown RBP9.18□□□□□ -0.94
RPSA-209ENST00000495394 ERVW-1Q9UQF0 538 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
RPSA-209ENST00000495394 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 URADA6NGE7 173 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 FAM25AB3EWG3 89 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 FAM25CB3EWG5 89 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 FAM25GB3EWG6 89 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 FFAR2O15552 330 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 SUV39H1O43463 412 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 PCDHGA12O60330 932 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TSPAN2O60636 221 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 OAS1P00973 400 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 AGTP01019 485 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 MPIP34949 423 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 HERVK_113P62684 666 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ERVK-24P63145 666 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TSPAN31Q12999 210 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 RIN1Q13671 783 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 GRIN2CQ14957 1233 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 MFSD13AQ14CX5 517 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 USP41Q3LFD5 358 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 MFSD7Q6UXD7 560 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 KCNK18Q7Z418 384 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ADGRA1Q86SQ6 560 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ADHFE1Q8IWW8 467 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 GPR137CQ8N3F9 429 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 C1orf52Q8N6N3 182 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 CCDC51Q96ER9 411 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 C14orf79Q96F83 325 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ZNF48Q96MX3 618 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 TUBGCP2Q9BSJ2 902 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 NLNQ9BYT8 704 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 GAL3ST2Q9H3Q3 398 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 RAB23Q9ULC3 237 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 POLIQ9UNA4 740 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 CHKBQ9Y259 395 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ASB4Q9Y574 426 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 PCDHGA7Q9Y5G6 932 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 PCDHGA6Q9Y5G7 932 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 KCNE2Q9Y6J6 123 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TRPM7Q96QT4 1865 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 CCDC160A6NGH7 325 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 GABRR3A8MPY1 467 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 SLC30A4O14863 429 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 HSPA12AO43301 675 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 KAT7O95251 611 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 CRHP06850 196 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ADRB3P13945 408 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 ETS1P14921 441 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 JUPP14923 745 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 BMP6P22004 513 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 CYP2C18P33260 490 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 RORAP35398 523 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 MSX2P35548 267 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 RPL35P42766 123 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 VEGFBP49765 207 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 PKNOX1P55347 436 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TPTEP56180 551 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 NUP107P57740 925 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 VSNL1P62760 191 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 MEF2AQ02078 507 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 MRPL49Q13405 166 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 CAPSQ13938 189 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TFDP1Q14186 410 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 UAP1Q16222 522 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 NTRK3Q16288 839 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 DUOXA2Q1HG44 320 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 ZRANB3Q5FWF4 1079 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 SPATA46Q5T0L3 261 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 SFRP5Q5T4F7 317 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 APOBEC3HQ6NTF7 200 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 CCDC137Q6PK04 289 aaKnown RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 TMIGD1Q6UXZ0 262 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 LCORLQ8N3X6 602 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
RPSA-209ENST00000495394 C17orf47Q8NEP4 570 aa9.17□□□□□ -0.94
RPSA-209ENST00000495394 C1orf162Q8NEQ5 155 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms