RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 ZNF542PQ5EBM4 170 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 GKAP1Q5VSY0 366 aaPredicted RBP17.11■□□□□ 0.33
PSMB4-206ENST00000495288 CGB2Q6NT52 195 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 LPCAT2Q7L5N7 544 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 SPATA21Q7Z572 469 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PIGWQ7Z7B1 504 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PDZD3Q86UT5 571 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 LSMEM2Q8N112 164 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PDPRQ8NCN5 879 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 AGR3Q8TD06 166 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 RMDN2Q96LZ7 410 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 SORT1Q99523 831 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 TRIM55Q9BYV6 548 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 ZDHHC5Q9C0B5 715 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 GSTO2Q9H4Y5 243 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PRMT8Q9NR22 394 aaPredicted RBP17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PTBP2Q9UKA9 531 aaKnown RBP17.11■□□□□ 0.33
PSMB4-206ENST00000495288 ASF1AQ9Y294 204 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 RAP2CQ9Y3L5 183 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 ANGPTL3Q9Y5C1 460 aa17.11■□□□□ 0.33
PSMB4-206ENST00000495288 PDZK1P1A8MUH7 402 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CCNT2O60583 730 aaKnown RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 C1orf105O95561 183 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CDKL1Q00532 357 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CTBSQ01459 385 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 DMPKQ09013 629 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 PRKAA1Q13131 559 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 RBBP7Q16576 425 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CCSMST1Q4G0I0 132 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CDKL4Q5MAI5 379 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 WDR45BQ5MNZ6 344 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 FRMD7Q6ZUT3 714 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 LONP2Q86WA8 852 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 DCP2Q8IU60 420 aaKnown RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 RASGRP3Q8IV61 690 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 SLC22A18ASQ8N1D0 253 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TCAIMQ8N3R3 496 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 ZNF781Q8N8C0 355 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 MFSD2AQ8NA29 543 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TFGQ92734 400 aaPredicted RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 RHBDF1Q96CC6 855 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 FERD3LQ96RJ6 166 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 PKP4Q99569 1192 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TRMOQ9BU70 441 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 CD244Q9BZW8 370 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TMEM168Q9H0V1 697 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TM9SF3Q9HD45 589 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 SEMA4BQ9NPR2 832 aaPredicted RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 DCTN4Q9UJW0 460 aa17.1■□□□□ 0.33
PSMB4-206ENST00000495288 TDRKHQ9Y2W6 561 aaKnown RBP17.1■□□□□ 0.33
PSMB4-206ENST00000495288 SPTY2D1-AS1A0A0U1RR47 76 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 SNX3O60493 162 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 TGDSO95455 350 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 WNT1P04628 370 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 RPS17P08708 135 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 AK4P27144 223 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 AP1S2P56377 157 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 RACK1P63244 317 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 CLCQ05315 142 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 EIF2B5Q13144 721 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 FZD2Q14332 565 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 KRT33BQ14525 404 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 PCBP2Q15366 365 aaKnown RBP eCLIP17.09■□□□□ 0.333e-8■■■■■ 34.3
PSMB4-206ENST00000495288 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 LAYNQ6UX15 382 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 UNC5DQ6UXZ4 953 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 TEX9Q8N6V9 391 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 CCDC197Q8NCU1 140 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 INSM2Q96T92 566 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 PRDM8Q9NQV8 689 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 OPTCQ9UBM4 332 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 ZDHHC2Q9UIJ5 367 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 PCTPQ9UKL6 214 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 PNMA8BQ9ULN7 279 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 WDR37Q9Y2I8 494 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 ASB1Q9Y576 335 aa17.09■□□□□ 0.33
PSMB4-206ENST00000495288 CFAP20Q9Y6A4 193 aaKnown RBP17.09■□□□□ 0.33
PSMB4-206ENST00000495288 A0A1W2PR77 199 aa17.08■□□□□ 0.32
PSMB4-206ENST00000495288 TLR4O00206 839 aa17.08■□□□□ 0.32
PSMB4-206ENST00000495288 STK16O75716 305 aa17.08■□□□□ 0.32
PSMB4-206ENST00000495288 TDGF1P13385 188 aa17.08■□□□□ 0.32
PSMB4-206ENST00000495288 CTSEP14091 401 aa17.08■□□□□ 0.32
PSMB4-206ENST00000495288 ARL1P40616 181 aaPredicted RBP17.08■□□□□ 0.32
PSMB4-206ENST00000495288 GDF5P43026 501 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms