RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ARHGEF18Q6ZSZ5 1173 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 MED25Q71SY5 747 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 HPS6Q86YV9 775 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 ADGRF3Q8IZF5 1079 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 CLDN19Q8N6F1 224 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 TMEM102Q8N9M5 508 aaPredicted RBP22.51■■□□□ 1.19
COL27A1-208ENST00000494780 ALG3Q92685 438 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 HGH1Q9BTY7 390 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 LRRC40Q9H9A6 602 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 ACTR10Q9NZ32 417 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 MAP4K5Q9Y4K4 846 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 DUSP10Q9Y6W6 482 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 SPTBP11277 2137 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 SPENQ96T58 3664 aaKnown RBP22.51■■□□□ 1.19
COL27A1-208ENST00000494780 DPM1O60762 260 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 IPO7O95373 1038 aaKnown RBP22.5■■□□□ 1.19
COL27A1-208ENST00000494780 PVRP15151 417 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 UQCRFS1P47985 274 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 PRKG2Q13237 762 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 NCF4Q15080 339 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 PTCHD3Q3KNS1 767 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 CDHR3Q6ZTQ4 885 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 ZBTB2Q8N680 514 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 TTC13Q8NBP0 860 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 STYXQ8WUJ0 223 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 CDKN2AIPNLQ96HQ2 116 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 PANX2Q96RD6 677 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 NRTNQ99748 197 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 XKR8Q9H6D3 395 aa22.5■■□□□ 1.19
COL27A1-208ENST00000494780 GOLGA6L9A6NEM1 432 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 SOWAHDA6NJG2 315 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 C9J4A7 227 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 LIN7AO14910 233 aaPredicted RBP22.49■■□□□ 1.19
COL27A1-208ENST00000494780 ZNF749O43361 778 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 PRSS56P0CW18 603 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 TPH1P17752 444 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 AGXTP21549 392 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 GNLYP22749 145 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 RRADP55042 308 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 DBN1Q16643 649 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 FHL5Q5TD97 284 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 FAM69BQ5VUD6 431 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 SPESP1Q6UW49 350 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 HOOK3Q86VS8 718 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 TMTC1Q8IUR5 882 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 PIANPQ8IYJ0 282 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 GLIS1Q8NBF1 620 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 FDCSPQ8NFU4 85 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.49■■□□□ 1.19
COL27A1-208ENST00000494780 DHRS4Q9BTZ2 278 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 KLHL25Q9H0H3 589 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 LRRC4CQ9HCJ2 640 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 ICKQ9UPZ9 632 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 PADI2Q9Y2J8 665 aa22.49■■□□□ 1.19
COL27A1-208ENST00000494780 RP1L1Q8IWN7 2480 aaPredicted RBP22.49■■□□□ 1.19
COL27A1-208ENST00000494780 QSOX1O00391 747 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 PSMD3O43242 534 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 METTL18O95568 372 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 SHMT2P34897 504 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 NSG1P42857 185 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 ITIH4Q14624 930 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 POU6F1Q14863 301 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 P3H1Q32P28 736 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 ZNF385CQ66K41 422 aaPredicted RBP22.48■■□□□ 1.19
COL27A1-208ENST00000494780 MICALCLQ6ZW33 695 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 RAB43Q86YS6 212 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 GPR135Q8IZ08 494 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 C19orf47Q8N9M1 422 aaKnown RBP22.48■■□□□ 1.19
COL27A1-208ENST00000494780 LRRC57Q8N9N7 239 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 FAM71DQ8N9W8 422 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 TCTN2Q96GX1 697 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 ALS2CR12Q96Q35 445 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 C17orf62Q9BQA9 187 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 NUDT9Q9BW91 350 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 SMARCAL1Q9NZC9 954 aa22.48■■□□□ 1.19
COL27A1-208ENST00000494780 SPTAN1Q13813 2472 aaKnown RBP22.48■■□□□ 1.19
COL27A1-208ENST00000494780 ZNF185O15231 689 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 PTMAP06454 111 aaKnown RBP22.47■■□□□ 1.19
COL27A1-208ENST00000494780 PSMA3P25788 255 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 JMJD6Q6NYC1 403 aaPredicted RBP22.47■■□□□ 1.19
COL27A1-208ENST00000494780 TBC1D21Q8IYX1 336 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 OR5AR1Q8NGP9 310 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 N4BP2L2Q92802 583 aaPredicted RBP22.47■■□□□ 1.19
COL27A1-208ENST00000494780 CHRNA10Q9GZZ6 450 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 GPR83Q9NYM4 423 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 POLG2Q9UHN1 485 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 ASF1AQ9Y294 204 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 REXO2Q9Y3B8 237 aaKnown RBP22.47■■□□□ 1.19
COL27A1-208ENST00000494780 AP1M2Q9Y6Q5 423 aa22.47■■□□□ 1.19
COL27A1-208ENST00000494780 SEC16AO15027 2179 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 AGFG2O95081 481 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 AP2A1O95782 977 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 FTH1P02794 183 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 UGT2B7P16662 529 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 ACADLP28330 430 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 ATP1A4Q13733 1029 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 INPP5JQ15735 1006 aaPredicted RBP22.46■■□□□ 1.19
COL27A1-208ENST00000494780 PACS1Q6VY07 963 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 UNC5AQ6ZN44 842 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 IP6K3Q96PC2 410 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms