RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 KRBOX1C9JBD0 128 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 KPNA5O15131 536 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 USP12O75317 370 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 WBP4O75554 376 aaKnown RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 OR4F21O95013 312 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 ARP10275 920 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 CALCRP30988 508 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 ACOT2P49753 483 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 GPR85P60893 370 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 SSTP61278 116 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 RRAS2P62070 204 aaPredicted RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 PSPHP78330 225 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 CHRNB3Q05901 458 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 GRAPQ13588 217 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 RAPSNQ13702 412 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 PAFAH1B3Q15102 231 aaKnown RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 PPP1R3AQ16821 1122 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 OR4F3Q6IEY1 312 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 FAHD1Q6P587 224 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 PLEKHM3Q6ZWE6 761 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 EFL1Q7Z2Z2 1120 aaKnown RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 KDELC2Q7Z4H8 507 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 KCNMB4Q86W47 210 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 KRT73Q86Y46 540 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 MCPH1Q8NEM0 835 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 LPCAT1Q8NF37 534 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 BSNDQ8WZ55 320 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 CCDC120Q96HB5 630 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 XYLT2Q9H1B5 865 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 GBA2Q9HCG7 927 aaPredicted RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 TNFRSF12AQ9NP84 129 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 KMT5AQ9NQR1 393 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 RGS18Q9NS28 235 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF275Q9NSD4 429 aaPredicted RBP4.71□□□□□ -1.65
PRKD3-210ENST00000494667 FAM105AQ9NUU6 356 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 COA4Q9NYJ1 87 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 LIPT1Q9Y234 373 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 ADAMTSL1Q8N6G6 1762 aa4.71□□□□□ -1.65
PRKD3-210ENST00000494667 MFSD2BA6NFX1 497 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 OR6C70A6NIJ9 312 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 A8MXK9 166 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 PRSS44E7EML9 344 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 PSMD3O43242 534 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 GATCO43716 136 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 CDK1P06493 297 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 GADD45AP24522 165 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 CYP2F1P24903 491 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TNFSF8P32971 234 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 MATKP42679 507 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 HSPA2P54652 639 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TGFB2P61812 414 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 DHODHQ02127 395 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 POU5F1BQ06416 359 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 PAN2Q504Q3 1202 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 INTS6LQ5JSJ4 861 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 NOL9Q5SY16 702 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 ATF7IP2Q5U623 682 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 HEATR6Q6AI08 1181 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TMEM107Q6UX40 140 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 DLEU7Q6UYE1 221 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 RRM2BQ7LG56 351 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 GPR149Q86SP6 731 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 STK32CQ86UX6 486 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TXNRD3Q86VQ6 643 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 ATCAYQ86WG3 371 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TMC8Q8IU68 726 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 CPA6Q8N4T0 437 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 COLGALT1Q8NBJ5 622 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 DNAJB8Q8NHS0 232 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 GPR152Q8TDT2 470 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 UTP15Q8TED0 518 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 APH1BQ8WW43 257 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 KAT6AQ92794 2004 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 KIAA1191Q96A73 305 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 TEKT5Q96M29 485 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 DMRTB1Q96MA1 342 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 DPYSL5Q9BPU6 564 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 WACQ9BTA9 647 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 CDCA4Q9BXL8 241 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 HDHD5Q9BXW7 423 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 ABCG4Q9H172 646 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 POMKQ9H5K3 350 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 RANBP3Q9H6Z4 567 aaPredicted RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 NT5DC2Q9H857 520 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 AKTIPQ9H8T0 292 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 GTSE1Q9NYZ3 720 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 EGFL7Q9UHF1 273 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 NUFIP1Q9UHK0 495 aaKnown RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 CDH9Q9ULB4 789 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 MTMR7Q9Y216 660 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 IPPQ9Y573 584 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 MYLKQ15746 1914 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 MEN1O00255 615 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 QSOX1O00391 747 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 SH3BP5O60239 455 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 USP2O75604 605 aaPredicted RBP4.71□□□□□ -1.66
PRKD3-210ENST00000494667 HMBSP08397 361 aa4.71□□□□□ -1.66
PRKD3-210ENST00000494667 HLA-EP13747 358 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms