RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KCNJ1P48048 391 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 SESN2P58004 480 aaPredicted RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 TUBB4BP68371 445 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 GPS2Q13227 327 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 TUBB2AQ13885 445 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 BOP1Q14137 746 aaKnown RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 SEMA3AQ14563 771 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 SIX1Q15475 284 aaPredicted RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 TSTD2Q5T7W7 516 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 LCN10Q6JVE6 187 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 ADGRF3Q8IZF5 1079 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 CCDC89Q8N998 374 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 LMNTD1Q8N9Z9 388 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 OR5AR1Q8NGP9 310 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 OR13J1Q8NGT2 312 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 FCRL4Q96PJ5 515 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 TRAPPC9Q96Q05 1148 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 TUBB2BQ9BVA1 445 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 FRMD8P1Q9BZ68 369 aaPredicted RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 TFB2MQ9H5Q4 396 aaKnown RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 MVB12BQ9H7P6 319 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 CASS4Q9NQ75 786 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 CHRAC1Q9NRG0 131 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 C1GALT1Q9NS00 363 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 POMT2Q9UKY4 750 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 PLAGL1Q9UM63 463 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 FARSAQ9Y285 508 aaKnown RBP9.31□□□□□ -0.92
MSH5-218ENST00000494646 ASF1AQ9Y294 204 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 KCNMB2Q9Y691 235 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 NBPF19A0A087WUL8 3843 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 ANKRD12Q6UB98 2062 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SLC5A10A0PJK1 596 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ERI2A8K979 691 aaKnown RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 IQCF5A8MTL0 148 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 TMEM150CB9EJG8 249 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 LIN7AO14910 233 aaPredicted RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 ARHGAP6O43182 974 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 MAP3K7O43318 606 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CPNE3O75131 537 aaKnown RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 FTH1P02794 183 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 TPBGLP0DKB5 382 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 PSMA3P25788 255 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ACADLP28330 430 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CXCR5P32302 372 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 GSDMDP57764 484 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 RPS15P62841 145 aaKnown RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 CRADDP78560 199 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ABRQ12979 859 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 RPA4Q13156 261 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SEMA5AQ13591 1074 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ITIH4Q14624 930 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CCNG2Q16589 344 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SYTL3Q4VX76 610 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 FASTKD1Q53R41 847 aaKnown RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 PLEKHS1Q5SXH7 462 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 FAM69BQ5VUD6 431 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 LYPLAL1Q5VWZ2 237 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CES3Q6UWW8 571 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ZNF534Q76KX8 674 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 GSTA5Q7RTV2 222 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 TRIM73Q86UV7 250 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 C2orf73Q8N5S3 287 aaPredicted RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 OR1L3Q8NH93 324 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CFAP61Q8NHU2 1237 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 C9orf43Q8TAL5 461 aaPredicted RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSH5-218ENST00000494646 CLIP3Q96DZ5 547 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 RANBP9Q96S59 729 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 TTC1Q99614 292 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SLC7A5P2Q9GIP4 190 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CHST8Q9H2A9 424 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ACTL8Q9H568 366 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CLMPQ9H6B4 373 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 IGSF5Q9NSI5 407 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SPHK1Q9NYA1 384 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ACTR10Q9NZ32 417 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 PAK5Q9P286 719 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 CIDEBQ9UHD4 219 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 SERTAD3Q9UJW9 196 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ANAPC5Q9UJX4 755 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 ICKQ9UPZ9 632 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 POLHQ9Y253 713 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
MSH5-218ENST00000494646 BTRCQ9Y297 605 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 TCAF1Q9Y4C2 921 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 FER1L5A0AVI2 2057 aa9.3□□□□□ -0.92
MSH5-218ENST00000494646 FLNCQ14315 2725 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 ASH1LQ9NR48 2969 aaKnown RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 C2orf74A8MZ97 194 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 ISM1B1AKI9 464 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 MEN1O00255 615 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 HCRTR1O43613 425 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 CEP104O60308 925 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 DNAJB5O75953 348 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 FGGP02679 453 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 KLK3P07288 261 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 GSTM1P09488 218 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms