RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 BUB3O43684 328 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 MED24O75448 989 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 BAG4O95429 457 aaKnown RBP4.18□□□□□ -1.74
SMC4-224ENST00000494612 C22orf31O95567 290 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 ATP1A1P05023 1023 aaKnown RBP4.18□□□□□ -1.74
SMC4-224ENST00000494612 OR52Z1P0C646 297 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 SMIM18P0DKX4 95 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 CETPP11597 493 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 PTPN3P26045 913 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 ERVFC1-1P60608 527 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
SMC4-224ENST00000494612 HSPB3Q12988 150 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 TNIP1Q15025 636 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 SPECC1Q5M775 1068 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 COMMD2Q86X83 199 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 CEP57L1Q8IYX8 460 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 CIARTQ8N365 385 aaPredicted RBP4.18□□□□□ -1.74
SMC4-224ENST00000494612 EXD1Q8NHP7 514 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 SIPA1Q96FS4 1042 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 PSD2Q9BQI7 771 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 NAA11Q9BSU3 229 aaPredicted RBP4.18□□□□□ -1.74
SMC4-224ENST00000494612 MRGBPQ9NV56 204 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 TUBE1Q9UJT0 475 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 PADI2Q9Y2J8 665 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 SNAPC4Q5SXM2 1469 aa4.18□□□□□ -1.74
SMC4-224ENST00000494612 CTAGE9A4FU28 777 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 TRIM77I1YAP6 450 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 GRID2O43424 1007 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 SYNGR3O43761 229 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CTSVO60911 334 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ZNF432O94892 652 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 HSPA4LO95757 839 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 LDLRP01130 860 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 H1F0P07305 194 aaKnown RBP4.17□□□□□ -1.74
SMC4-224ENST00000494612 LINGO3P0C6S8 592 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 OR2T7P0C7T2 308 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CTAGE8P0CG41 777 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CSF2RAP15509 400 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CYP11B2P19099 503 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 NR1D1P20393 614 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 PCGF2P35227 344 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ZNF75DP51815 510 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 THOP1P52888 689 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 TERF1P54274 439 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CDH11P55287 796 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 VWC2Q2TAL6 325 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 PHLDA2Q53GA4 152 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 MDH1BQ5I0G3 518 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CORO6Q6QEF8 472 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ANO5Q75V66 913 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 DGLUCYQ7Z3D6 616 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 TMPRSS11BQ86T26 416 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 EXOC3L1Q86VI1 746 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 CTAGE4Q8IX94 777 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ARHGAP24Q8N264 748 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 DNAJC22Q8N4W6 341 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 PI4KAP1Q8N8J0 262 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 SLC24A4Q8NFF2 622 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ZNF653Q96CK0 615 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ALG14Q96F25 216 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ABHD8Q96I13 439 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 SFXN2Q96NB2 322 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 NUP85Q9BW27 656 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ACKR4Q9NPB9 350 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 DPP3Q9NY33 737 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 TAAR2Q9P1P5 351 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 ZNF541Q9H0D2 1346 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 GAPVD1Q14C86 1478 aa4.17□□□□□ -1.74
SMC4-224ENST00000494612 IGLV5-45A0A087WSX0 123 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 MED19A0JLT2 244 aaPredicted RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 PENKP01210 267 aaPredicted RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 CRYAAP02489 173 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 AMD1P17707 334 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ERCC2P18074 760 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 MSH3P20585 1137 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 MPZP25189 248 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 CCR10P46092 362 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 SLC9A3P48764 834 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 RAB28P51157 221 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 RAD23AP54725 363 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 RPS18P62269 152 aaKnown RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 RBPJQ06330 500 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 COG2Q14746 738 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 PSMD6Q15008 389 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 TCP11X2Q5H9J9 407 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 FAM76BQ5HYJ3 339 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ARMC4Q5T2S8 1044 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 GRTP1Q5TC63 336 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 CST9LP1Q5W188 147 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 RBPMS2Q6ZRY4 209 aaKnown RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 C9orf139Q6ZV77 190 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ZNF771Q7L3S4 317 aaPredicted RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 CHST3Q7LGC8 479 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 VSIG1Q86XK7 387 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 NAGSQ8N159 534 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 TTC30BQ8N4P2 665 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 L3MBTL4Q8NA19 623 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 XXYLT1Q8NBI6 393 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 CAMKVQ8NCB2 501 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms