RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 LPCAT1Q8NF37 534 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 CT55Q8WUE5 264 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 RSC1A1Q92681 617 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 CDKL2Q92772 493 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 TRIB3Q96RU7 358 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 ZNF624Q9P2J8 865 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 ATXN10Q9UBB4 475 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 CPNE7Q9UBL6 633 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 LNPEPQ9UIQ6 1025 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 RIMKLBQ9ULI2 386 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 SOX13Q9UN79 622 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 TEX264Q9Y6I9 313 aa11.5□□□□□ -0.57
CSNK1E-212ENST00000494610 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 RIPK2O43353 540 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 VPS4BO75351 444 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 RFPL1O75677 317 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 AGTP01019 485 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 NUDT17P0C025 328 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 F3P13726 295 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 ZNF8P17098 575 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 MGAT1P26572 445 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 HSD17B3P37058 310 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 UBE2IP63279 158 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 MC1RQ01726 317 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 NAB1Q13506 487 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 LRP8Q14114 963 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 KCNAB1Q14722 419 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 SIRPB2Q5JXA9 342 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 STEAP4Q687X5 459 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 LRIG3Q6UXM1 1119 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 SLC9B2Q86UD5 537 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 SLC25A41Q8N5S1 370 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 CPT1CQ8TCG5 803 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 BRSK1Q8TDC3 778 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 EID2BQ96D98 161 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 APOL2Q9BQE5 337 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 EFHD1Q9BUP0 239 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 KIFC1Q9BW19 673 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 TRIT1Q9H3H1 467 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 OSGEPL1Q9H4B0 414 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 KLC4Q9NSK0 619 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 SYBUQ9NX95 663 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 NSMCE4AQ9NXX6 385 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 NINJ2Q9NZG7 142 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 KCND3Q9UK17 655 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 VPS4AQ9UN37 437 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 DNAJC16Q9Y2G8 782 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 TCAF1Q9Y4C2 921 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 DOPEY1Q5JWR5 2465 aa11.49□□□□□ -0.57
CSNK1E-212ENST00000494610 OTOGQ6ZRI0 2925 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 C2orf81A6NN90 581 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 ANKRD66B4E2M5 251 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 GRID2O43424 1007 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 MTX2O75431 263 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 CREG1O75629 220 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 RASSF9O75901 435 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 ACSL3O95573 720 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 C9P02748 559 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 SLC19A1P41440 591 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 PEX6Q13608 980 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 DNASE1L3Q13609 305 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 GALNT3Q14435 633 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 TAF1AQ15573 450 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 ZDHHC20Q5W0Z9 365 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 DENND5AQ6IQ26 1287 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 CYS1Q717R9 158 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 TAOK1Q7L7X3 1001 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 GLT6D1Q7Z4J2 308 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 LMNTD2Q8IXW0 634 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 RIBC1Q8N443 379 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 SSC4DQ8WTU2 575 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 CFAP36Q96G28 342 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 SIGLEC10Q96LC7 697 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 FUT8Q9BYC5 575 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 OR2AG1Q9H205 316 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 ACTL8Q9H568 366 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 MAGEE1Q9HCI5 957 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 RAD18Q9NS91 495 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 FETUBQ9UGM5 382 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 POLHQ9Y253 713 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 CSMD2Q7Z408 3487 aa11.48□□□□□ -0.57
CSNK1E-212ENST00000494610 PCSK5Q92824 1860 aa11.47□□□□□ -0.57
CSNK1E-212ENST00000494610 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
CSNK1E-212ENST00000494610 ARGFXA6NJG6 315 aa11.47□□□□□ -0.57
CSNK1E-212ENST00000494610 OR52A4PA6NMU1 304 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms