RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TCAIMQ8N3R3 496 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 BRINP2Q9C0B6 783 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 RSPH9Q9H1X1 276 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 RIC8BQ9NVN3 520 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 STX18Q9P2W9 335 aaKnown RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 TRPS1Q9UHF7 1281 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 LSM1O15116 133 aaKnown RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 HIST1H2AGP0C0S8 130 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 HIST1H2ADP20671 130 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 CYP2A7P20853 494 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 KIR2DL1P43626 348 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 GPR1P46091 355 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 HNMTP50135 292 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 AP1S2P56377 157 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 FAM46CQ5VWP2 391 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 RNF165Q6ZSG1 346 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 LRRC70Q7Z2Q7 622 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 CHPFQ8IZ52 775 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 ZNF513Q8N8E2 541 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-225ENST00000494465 MSLNLQ96KJ4 702 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 HIST1H2AHQ96KK5 128 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 TEX37Q96LM6 180 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 HIST1H2AJQ99878 128 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 H2AFJQ9BTM1 129 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 CLDND1Q9NY35 253 aa16.15■□□□□ 0.18
ATG4B-225ENST00000494465 CCDC85CA6NKD9 419 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 ARHGEF33A8MVX0 844 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 C9JVG2 144 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 MID1O15344 667 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 CFLARO15519 480 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 CAPN3P20807 821 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 GRIK2Q13002 908 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PTCHD3Q3KNS1 767 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 MMEL1Q495T6 779 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 WLSQ5T9L3 541 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 AGBL4Q5VU57 503 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 NEK5Q6P3R8 708 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 MCOLN3Q8TDD5 553 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 CXorf40AQ8TE69 158 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 FOXJ1Q92949 421 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 TMEM159Q96B96 161 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 C1orf50Q9BV19 199 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 OR2AG1Q9H205 316 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 NR5A2O00482 541 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 MRASO14807 208 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PDHA2P29803 388 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 HMOX2P30519 316 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 MTHFRP42898 656 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PSME3P61289 254 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 ABRQ12979 859 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 CST6Q15828 149 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 ATP6AP1LQ52LC2 224 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 BLOC1S3Q6QNY0 202 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 CACUL1Q86Y37 369 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 ZNF547Q8IVP9 402 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PLA2G15Q8NCC3 412 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 PYCR2Q96C36 320 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 SERPINI1Q99574 410 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 TRIM39Q9HCM9 518 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 FARSBQ9NSD9 589 aaKnown RBP16.14■□□□□ 0.17
ATG4B-225ENST00000494465 ATXN10Q9UBB4 475 aa16.14■□□□□ 0.17
ATG4B-225ENST00000494465 FFAR3O14843 346 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 GPR42O15529 346 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 BMP8BP34820 402 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 PTDSS1P48651 473 aaKnown RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 HTR4Q13639 388 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 SYTL3Q4VX76 610 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 HACD2Q6Y1H2 254 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 NUDT18Q6ZVK8 323 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 KCNV2Q8TDN2 545 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 FBXL8Q96CD0 374 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 ZNF576Q9H609 170 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 HEBP1Q9NRV9 189 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 MAP10Q9P2G4 905 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 EPS15L1Q9UBC2 864 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 SERGEFQ9UGK8 458 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 COL4A2P08572 1712 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 BBIP1A8MTZ0 92 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 E7ENX8 843 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 ANHXE9PGG2 379 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 PRAMEF4O60810 478 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 WDR47O94967 919 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 XRCC1P18887 633 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 PBLDP30039 288 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 GCKP35557 465 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 TNFRSF4P43489 277 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 VPS26BQ4G0F5 336 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 PDCD4Q53EL6 469 aaKnown RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 PRAMEF9Q5VWM5 478 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 MTSS1LQ765P7 747 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 TRIM46Q7Z4K8 759 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 FNDC5Q8NAU1 212 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 USP7Q93009 1102 aa16.13■□□□□ 0.17
ATG4B-225ENST00000494465 ZCCHC2Q9C0B9 1178 aaKnown RBP16.13■□□□□ 0.17
ATG4B-225ENST00000494465 KLQ9UEF7 1012 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms