RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ADRA1DP25100 572 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 NDUFS1P28331 727 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 RPL22P35268 128 aaKnown RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 GRIA1P42261 906 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 RPA4Q13156 261 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 TERF2Q15554 542 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 TSTD2Q5T7W7 516 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 IRGCQ6NXR0 463 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 DUS1LQ6P1R4 473 aaKnown RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 AFTPHQ6ULP2 937 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 TAS2R42Q7RTR8 314 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 VASH2Q86V25 355 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 CFAP206Q8IYR0 622 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 LILRA3Q8N6C8 439 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 CD180Q99467 661 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 SPRY4Q9C004 299 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 OR52A5Q9H2C5 316 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 TCAF1Q9Y4C2 921 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 PCDHGA4Q9Y5G9 962 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 CCDC78A2IDD5 438 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CCDC162PA2VCL2 907 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 TLCD2A6NGC4 264 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 OR51F1A6NGY5 319 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 EIF4E1BA6NMX2 242 aaKnown RBP12.85□□□□□ -0.35
ERCC3-209ENST00000494464 EIF3HO15372 352 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERCC3-209ENST00000494464 RASSF9O75901 435 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 ABHD2P08910 425 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CD151P48509 253 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 PPP1CAP62136 330 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 IFFO1Q0D2I5 559 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CBLBQ13191 982 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 MAP7Q14244 749 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CACHD1Q5VU97 1274 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 LYPLAL1Q5VWZ2 237 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CARFQ8N187 725 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CLDN19Q8N6F1 224 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
ERCC3-209ENST00000494464 CTRCQ99895 268 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 ADAM21Q9UKJ8 722 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 COLEC10Q9Y6Z7 277 aa12.85□□□□□ -0.35
ERCC3-209ENST00000494464 AP3B1O00203 1094 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 IFRD1O00458 451 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 KIF1CO43896 1103 aaKnown RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TTC4O95801 387 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 DLGAP3O95886 979 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 POLBP06746 335 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 NELFEP18615 380 aaKnown RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TPSB2P20231 275 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 BASP1P80723 227 aaKnown RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 CDK16Q00536 496 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 SLC29A2Q14542 456 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 IL11RAQ14626 422 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TPSAB1Q15661 275 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 KIAA1614Q5VZ46 1190 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ZNF449Q6P9G9 518 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 CERS6Q6ZMG9 384 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 KMT5CQ86Y97 462 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 IL22RA1Q8N6P7 574 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 NAT8LQ8N9F0 302 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ACVR1CQ8NER5 493 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 OR2W6PQ8NHA6 318 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 CPT1BQ92523 772 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 HDAC10Q969S8 669 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 PGM2Q96G03 612 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ZNF778Q96MU6 729 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TTC1Q99614 292 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ROPN1BQ9BZX4 212 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 ROPN1Q9HAT0 212 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-209ENST00000494464 NINJ2Q9NZG7 142 aa12.84□□□□□ -0.35
ERCC3-209ENST00000494464 SLC2A6Q9UGQ3 507 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms