RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 AKT1P31749 480 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PIK3CGP48736 1102 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 CLCNKAP51800 687 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SEC13P55735 322 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PFN3P60673 137 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 CTBSQ01459 385 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 GTF2H2Q13888 395 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 GRB7Q14451 532 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 INPP5AQ14642 412 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 C18orf21Q32NC0 220 aaPredicted RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 PRAMEF9Q5VWM5 478 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 METRNLQ641Q3 311 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 RAET1GQ6H3X3 334 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 CAPRIN2Q6IMN6 1127 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 GTF2H2CQ6P1K8 395 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 LETMD1Q6P1Q0 360 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 UNC5DQ6UXZ4 953 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 EP400NLQ6ZTU2 488 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 GPRIN3Q6ZVF9 776 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ACAD11Q709F0 780 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 UBE2R2Q712K3 238 aaPredicted RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 DET1Q7L5Y6 550 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SYT13Q7L8C5 426 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 LRRC70Q7Z2Q7 622 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 UNC80Q8N2C7 3258 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 LILRA3Q8N6C8 439 aaPredicted RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 OR52B6Q8NGF0 335 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 RP9Q8TA86 221 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 HM13Q8TCT9 377 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 MCOLN3Q8TDD5 553 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TSPEARQ8WU66 669 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ELMO1Q92556 727 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 USP7Q93009 1102 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TMEM159Q96B96 161 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 KLHL29Q96CT2 875 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 C19orf60Q96EN9 201 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 WDR34Q96EX3 536 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SIPA1Q96FS4 1042 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 CCDC138Q96M89 665 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 RILPQ96NA2 401 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 INSM2Q96T92 566 aaPredicted RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 BTBD10Q9BSF8 475 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 MENTQ9BUN1 341 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 LGR4Q9BXB1 951 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TBC1D10AQ9BXI6 508 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SLC29A3Q9BZD2 475 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ZDHHC5Q9C0B5 715 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 BRINP2Q9C0B6 783 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 OR2AG1Q9H205 316 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TRIOBPQ9H2D6 2365 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 AKTIPQ9H8T0 292 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SGK2Q9HBY8 427 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 GPR27Q9NS67 375 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ASIC5Q9NY37 505 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ARMCX1Q9P291 453 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 WNT16Q9UBV4 365 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 EBF1Q9UH73 591 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TRPS1Q9UHF7 1281 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 EIF2B4Q9UI10 523 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 HS3ST3A1Q9Y663 406 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 A0A1W2PQU0 124 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ARHGEF33A8MVX0 844 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 NEMP1O14524 444 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TNFRSF10CO14798 259 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 INPP4BO15327 924 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 DCXO43602 365 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 KATNA1O75449 491 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 PAK4O96013 591 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 ALDOCP09972 364 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 THRAP10827 490 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 COX4I1P13073 169 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ACPPP15309 386 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 GABRG2P18507 467 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TSPAN8P19075 237 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 NDUFV2P19404 249 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 CYP2A7P20853 494 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 GPX3P22352 226 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 IGFALSP35858 605 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 GDF5P43026 501 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ZFP36L2P47974 494 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 HSPA7P48741 367 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 TPMTP51580 245 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 CCR5P51681 352 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 MNAT1P51948 309 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 RAP1GDS1P52306 607 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 DGKEP52429 567 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 KIAA1024LP59773 190 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 KCNJ2P63252 427 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 ELF3P78545 371 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 MLLT1Q03111 559 aaPredicted RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 BOP1Q14137 746 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 UBAP2LQ14157 1087 aaKnown RBP6.62□□□□□ -1.35
MSH5-217ENST00000494458 GAS6Q14393 721 aa6.62□□□□□ -1.35
MSH5-217ENST00000494458 KIAA0040Q15053 153 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms